Gene name: GAL83
Reference locus (S288C): YER027C
Gene biotype: protein_coding
Description: One of three possible beta-subunits of the Snf1 kinase complex; allows nuclear localization of the Snf1 kinase complex in the presence of a nonfermentable carbon source; necessary and sufficient for phosphorylation of the Mig2p transcription factor in response to alkaline stress; functionally redundant with SIP1 and SIP2 for the phosphorylation of Mig1p in response to glucose deprivation; contains a glycogen-binding domain
Top 10 interactors (score): SNF1 (0.999); SNF4 (0.999); SIP1 (0.994); SIP2 (0.991); SAK1 (0.978); TOS3 (0.946); VPS34 (0.912); VPS30 (0.909); VPS15 (0.904); ELM1 (0.893); SIP4 (0.881); SDS23 (0.867); SDS24 (0.867); MIG1 (0.864); GLC7 (0.832); REG1 (0.827); KIN4 (0.799); HXK2 (0.793); YPL150W (0.792); FRK1 (0.792)
Homologues (species, bitscore): PRKAB2 (Homo sapiens, 96.3); Prkab2 (Mus musculus, 96.3); prkab1a (Danio rerio, 87.4); prkab2 (Xenopus tropicalis, 97.4); alc (Drosophila melanogaster, 80.9); aakb-1 (Caenorhabditis elegans, 73.9); AT4G16360 (Arabidopsis thaliana, 68.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005299.1:203006-204259:- | gene-YER027C_AKU4011 | rna-NM_001178918.1_AKU4011 | cds-NP_010944.1_AKU4011 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000011.1:221482-222735:+ | gene-YER027C_BG1 | rna-NM_001178918.1_BG1 | cds-NP_010944.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005507.1:211895-213148:- | gene-YER027C_Bruggeman | rna-NM_001178918.1_Bruggeman | cds-NP_010944.1_Bruggeman | 99.3 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005523.1:206009-207262:- | gene-YER027C_CAT1 | rna-NM_001178918.1_CAT1 | cds-NP_010944.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005363.1:202929-204182:- | gene-YER027C_CBS1585 | rna-NM_001178918.1_CBS1585 | cds-NP_010944.1_CBS1585 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005347.1:204862-206115:- | gene-YER027C_CBS436 | rna-NM_001178918.1_CBS436 | cds-NP_010944.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005331.1:203173-204426:- | gene-YER027C_CBS6412 | rna-NM_001178918.1_CBS6412 | cds-NP_010944.1_CBS6412 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005315.1:208439-209692:- | gene-YER027C_CBS6413 | rna-NM_001178918.1_CBS6413 | cds-NP_010944.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001526.1:206918-208171:- | gene-YER027C_CENPK1137D | rna-NM_001178918.1_CENPK1137D | cds-NP_010944.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005475.1:203638-204891:- | gene-YER027C_EthanolRed | rna-NM_001178918.1_EthanolRed | cds-NP_010944.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005539.1:203903-205156:- | gene-YER027C_FaliES1 | rna-NM_001178918.1_FaliES1 | cds-NP_010944.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000192.1:1662-2915:- | gene-YER027C_JAY291 | rna-NM_001178918.1_JAY291 | cds-NP_010944.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005411.1:207328-208581:- | gene-YER027C_MUCL30387 | rna-NM_001178918.1_MUCL30387 | cds-NP_010944.1_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005443.1:203559-204812:- | gene-YER027C_MUCL30388 | rna-NM_001178918.1_MUCL30388 | cds-NP_010944.1_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005283.1:201973-203226:- | gene-YER027C_MUCL39482 | rna-NM_001178918.1_MUCL39482 | cds-NP_010944.1_MUCL39482 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005427.1:209057-210310:- | gene-YER027C_MUCL42920 | rna-NM_001178918.1_MUCL42920 | cds-NP_010944.1_MUCL42920 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011814.1:208978-210231:- | gene-YER027C_NCIM3186 | rna-NM_001178918.1_NCIM3186 | cds-NP_010944.1_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005267.1:207044-208297:- | gene-YER027C_NCYC1407 | rna-NM_001178918.1_NCYC1407 | cds-NP_010944.1_NCYC1407 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994144.1:217670-218923:- | gene-YER027C_PE2H3 | rna-NM_001178918.1_PE2H3 | cds-NP_010944.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999876.1:207610-208863:- | gene-YER027C_PE2H4 | rna-NM_001178918.1_PE2H4 | cds-NP_010944.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001137.3:208979-210232:- | gene-YER027C_S288C | rna-NM_001178918.1_S288C | cds-NP_010944.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000020.1:33451-34704:+ | gene-YER027C_SA1 | rna-NM_001178918.1_SA1 | cds-NP_010944.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005491.1:204674-205927:- | gene-YER027C_ThermosaccDry | rna-NM_001178918.1_ThermosaccDry | cds-NP_010944.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005459.1:203766-205019:- | gene-YER027C_VR1 | rna-NM_001178918.1_VR1 | cds-NP_010944.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000009.1:201885-203138:- | gene-YER027C_ZTW1 | rna-NM_001178918.1_ZTW1 | cds-NP_010944.1_ZTW1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047491.1:205752-207005:- | gene-YER027C_Sparadoxus | rna-NM_001178918.1_Sparadoxus | cds-NP_010944.1_Sparadoxus | 91.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |