Gene name: GAL3
Reference locus (S288C): YDR009W
Gene biotype: protein_coding
Description: Protein GAL3; Transcriptional regulator; involved in activation of the GAL genes in response to galactose; forms a complex with Gal80p to relieve Gal80p inhibition of Gal4p; binds galactose and ATP but does not have galactokinase activity; GAL3 has a paralog, GAL1, that arose from the whole genome duplication; Belongs to the GHMP kinase family. GalK subfamily
Top 10 interactors (score): GAL10 (0.999); GAL7 (0.999); GAL80 (0.999); GAL4 (0.99); GAL1 (0.96); GAL2 (0.946); TRP3 (0.907); PGM2 (0.827); TRP1 (0.774); URA3 (0.752); MIG1 (0.704); ERG12 (0.642); PRB1 (0.639); HIS4 (0.638); PSA1 (0.611); YHL012W (0.607); HIS3 (0.605); SUC2 (0.6); UGP1 (0.574); LYS2 (0.572)
Homologues (species, bitscore): GALK2 (Homo sapiens, 246.1); Galk2 (Mus musculus, 239.6); galk2 (Danio rerio, 247.7); galk2 (Xenopus tropicalis, 238.4); Galk (Drosophila melanogaster, 208.4); tag-96 (Caenorhabditis elegans, 181.4); GALK (Arabidopsis thaliana, 238.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:448685-450247:+ | gene-YDR009W_AKU4011 | rna-NM_001180317.1_AKU4011 | cds-NP_010292.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000102.1:98904-100466:- | gene-YDR009W_BG1 | rna-NM_001180317.1_BG1 | cds-NP_010292.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:469291-470853:+ | gene-YDR009W_Bruggeman | rna-NM_001180317.1_Bruggeman | cds-NP_010292.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:462136-463698:+ | gene-YDR009W_CAT1 | rna-NM_001180317.1_CAT1 | cds-NP_010292.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:445897-447459:+ | gene-YDR009W_CBS1585 | rna-NM_001180317.1_CBS1585 | cds-NP_010292.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:462666-464228:+ | gene-YDR009W_CBS436 | rna-NM_001180317.1_CBS436 | cds-NP_010292.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:443144-444706:+ | gene-YDR009W_CBS6412 | rna-NM_001180317.1_CBS6412 | cds-NP_010292.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:464835-466397:+ | gene-YDR009W_CBS6413 | rna-NM_001180317.1_CBS6413 | cds-NP_010292.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:462297-463859:+ | gene-YDR009W_CENPK1137D | rna-NM_001180317.1_CENPK1137D | cds-NP_010292.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:457516-459078:+ | gene-YDR009W_EthanolRed | rna-NM_001180317.1_EthanolRed | cds-NP_010292.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:463687-465249:+ | gene-YDR009W_FaliES1 | rna-NM_001180317.1_FaliES1 | cds-NP_010292.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000442.1:6810-8372:- | gene-YDR009W_JAY291 | rna-NM_001180317.1_JAY291 | cds-NP_010292.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:463164-464726:+ | gene-YDR009W_MUCL30387 | rna-NM_001180317.1_MUCL30387 | cds-NP_010292.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:453624-455186:+ | gene-YDR009W_MUCL30388 | rna-NM_001180317.1_MUCL30388 | cds-NP_010292.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:447266-448828:+ | gene-YDR009W_MUCL39482 | rna-NM_001180317.1_MUCL39482 | cds-NP_010292.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:368696-370258:+ | gene-YDR009W_MUCL42920 | rna-NM_001180317.1_MUCL42920 | cds-NP_010292.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:463357-464919:+ | gene-YDR009W_NCIM3186 | rna-NM_001180317.1_NCIM3186 | cds-NP_010292.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:446188-447750:+ | gene-YDR009W_NCYC1407 | rna-NM_001180317.1_NCYC1407 | cds-NP_010292.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:461803-463365:+ | gene-YDR009W_PE2H3 | rna-NM_001180317.1_PE2H3 | cds-NP_010292.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:461108-462670:+ | gene-YDR009W_PE2H4 | rna-NM_001180317.1_PE2H4 | cds-NP_010292.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:463434-464996:+ | gene-YDR009W_S288C | rna-NM_001180317.1_S288C | cds-NP_010292.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000099.1:6971-8533:- | gene-YDR009W_SA1 | rna-NM_001180317.1_SA1 | cds-NP_010292.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:463166-464728:+ | gene-YDR009W_ThermosaccDry | rna-NM_001180317.1_ThermosaccDry | cds-NP_010292.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:467606-469168:+ | gene-YDR009W_VR1 | rna-NM_001180317.1_VR1 | cds-NP_010292.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000006.1:461062-462624:+ | gene-YDR009W_ZTW1 | rna-NM_001180317.1_ZTW1 | cds-NP_010292.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:465260-466822:+ | gene-YDR009W_Sparadoxus | rna-NM_001180317.1_Sparadoxus | cds-NP_010292.1_Sparadoxus | 90.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |