Gene name: GAB1
Reference locus (S288C): YLR459W
Gene biotype: protein_coding
Description: GPI transamidase subunit; involved in attachment of glycosylphosphatidylinositol (GPI) anchors to proteins; may have a role in recognition of the attachment signal or of the lipid portion of GPI; Belongs to the PIGU family
Top 10 interactors (score): GPI8 (0.999); GPI17 (0.999); GAA1 (0.999); GPI16 (0.999); BST1 (0.984); GPI13 (0.934); GPI10 (0.922); MET2 (0.88); VMA6 (0.877); CDC9 (0.868); GPI2 (0.861); GPI18 (0.824); GPI19 (0.8); GPI14 (0.773); GPI11 (0.729); DPM1 (0.703); SPT14 (0.688); CWH43 (0.658); RER1 (0.649); LAS21 (0.63)
Homologues (species, bitscore): PIGU (Homo sapiens, 165.2); Pigu (Mus musculus, 164.5); pigu (Danio rerio, 167.9); pigu (Xenopus tropicalis, 166.8); PIG-U (Drosophila melanogaster, 161.4); T22C1.3 (Caenorhabditis elegans, 129.0); AT1G63110 (Arabidopsis thaliana, 117.9)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:995618-996802:+ | gene-YLR459W_AKU4011 | rna-NM_001182347.1_AKU4011 | cds-NP_013564.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000002.1:963-2147:- | gene-YLR459W_BG1 | rna-NM_001182347.1_BG1 | cds-NP_013564.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:1035208-1036392:+ | gene-YLR459W_Bruggeman | rna-NM_001182347.1_Bruggeman | cds-NP_013564.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:1030259-1031443:+ | gene-YLR459W_CAT1 | rna-NM_001182347.1_CAT1 | cds-NP_013564.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:1031209-1032393:+ | gene-YLR459W_CBS1585 | rna-NM_001182347.1_CBS1585 | cds-NP_013564.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:1020853-1022037:+ | gene-YLR459W_CBS436 | rna-NM_001182347.1_CBS436 | cds-NP_013564.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:1067238-1068422:+ | gene-YLR459W_CBS6412 | rna-NM_001182347.1_CBS6412 | cds-NP_013564.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:1031978-1033162:+ | gene-YLR459W_CBS6413 | rna-NM_001182347.1_CBS6413 | cds-NP_013564.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:1041964-1043148:+ | gene-YLR459W_CENPK1137D | rna-NM_001182347.1_CENPK1137D | cds-NP_013564.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:988635-989819:+ | gene-YLR459W_EthanolRed | rna-NM_001182347.1_EthanolRed | cds-NP_013564.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:1023906-1025090:+ | gene-YLR459W_FaliES1 | rna-NM_001182347.1_FaliES1 | cds-NP_013564.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000300.1:840-2024:- | gene-YLR459W_JAY291 | rna-NM_001182347.1_JAY291 | cds-NP_013564.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:1034690-1035874:+ | gene-YLR459W_MUCL30387 | rna-NM_001182347.1_MUCL30387 | cds-NP_013564.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:1042601-1043785:+ | gene-YLR459W_MUCL30388 | rna-NM_001182347.1_MUCL30388 | cds-NP_013564.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:1032443-1033627:+ | gene-YLR459W_MUCL39482 | rna-NM_001182347.1_MUCL39482 | cds-NP_013564.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:1032892-1034076:+ | gene-YLR459W_MUCL42920 | rna-NM_001182347.1_MUCL42920 | cds-NP_013564.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:1057308-1058492:+ | gene-YLR459W_NCIM3186 | rna-NM_001182347.1_NCIM3186 | cds-NP_013564.1_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:1041879-1043063:+ | gene-YLR459W_NCYC1407 | rna-NM_001182347.1_NCYC1407 | cds-NP_013564.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:1034573-1035757:+ | gene-YLR459W_PE2H3 | rna-NM_001182347.1_PE2H3 | cds-NP_013564.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:1034317-1035501:+ | gene-YLR459W_PE2H4 | rna-NM_001182347.1_PE2H4 | cds-NP_013564.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:1057334-1058518:+ | gene-YLR459W_S288C | rna-NM_001182347.1_S288C | cds-NP_013564.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000007.1:968-2152:- | gene-YLR459W_SA1 | rna-NM_001182347.1_SA1 | cds-NP_013564.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:1026984-1028168:+ | gene-YLR459W_ThermosaccDry | rna-NM_001182347.1_ThermosaccDry | cds-NP_013564.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:1033725-1034909:+ | gene-YLR459W_VR1 | rna-NM_001182347.1_VR1 | cds-NP_013564.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000025.1:357236-358420:+ | gene-YLR459W_ZTW1 | rna-NM_001182347.1_ZTW1 | cds-NP_013564.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:1007308-1008492:+ | gene-YLR459W_Sparadoxus | rna-NM_001182347.1_Sparadoxus | cds-NP_013564.1_Sparadoxus | 92.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |