FYV4 (YHR059W)


Gene profile

Gene name: FYV4
Reference locus (S288C): YHR059W
Gene biotype: protein_coding

Description: Protein FYV4, mitochondrial; Protein of unknown function; required for survival upon exposure to K1 killer toxin; Belongs to the mitochondrion-specific ribosomal protein mS41 family

Top 10 interactors (score): MRPS5 (0.994); RSM27 (0.989); MRPS8 (0.983); MRPS18 (0.982); RSM23 (0.98); RSM7 (0.979); MRPS9 (0.979); RSM19 (0.978); NAM9 (0.978); MRP21 (0.977); RSM26 (0.977); MRP10 (0.977); RSM18 (0.976); MRPS16 (0.972); IMG1 (0.964); RSM25 (0.957); MRPL16 (0.95); MRPL23 (0.95); RSM10 (0.949); MRPL20 (0.946)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005302.1:206367-206759:+ gene-YHR059W_AKU4011 rna-NM_001179189.1_AKU4011 cds-NP_011926.1_AKU4011 99.7 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000053.1:127507-127899:+ gene-YHR059W_BG1 rna-NM_001179189.1_BG1 cds-NP_011926.1_BG1 100.0 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005510.1:214125-214517:+ gene-YHR059W_Bruggeman rna-NM_001179189.1_Bruggeman cds-NP_011926.1_Bruggeman 99.2 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005526.1:208913-209305:+ gene-YHR059W_CAT1 rna-NM_001179189.1_CAT1 cds-NP_011926.1_CAT1 100.0 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005366.1:205473-205865:+ gene-YHR059W_CBS1585 rna-NM_001179189.1_CBS1585 cds-NP_011926.1_CBS1585 99.7 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005350.1:203430-203822:+ gene-YHR059W_CBS436 rna-NM_001179189.1_CBS436 cds-NP_011926.1_CBS436 99.2 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005328.1:205705-206097:+ gene-YHR059W_CBS6412 rna-NM_001179189.1_CBS6412 cds-NP_011926.1_CBS6412 99.7 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005318.1:206537-206929:+ gene-YHR059W_CBS6413 rna-NM_001179189.1_CBS6413 cds-NP_011926.1_CBS6413 99.7 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001529.1:213271-213663:+ gene-YHR059W_CENPK1137D rna-NM_001179189.1_CENPK1137D cds-NP_011926.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005478.1:205864-206256:+ gene-YHR059W_EthanolRed rna-NM_001179189.1_EthanolRed cds-NP_011926.1_EthanolRed 99.7 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005542.1:206841-207233:+ gene-YHR059W_FaliES1 rna-NM_001179189.1_FaliES1 cds-NP_011926.1_FaliES1 99.7 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000280.1:10075-10467:- gene-YHR059W_JAY291 rna-NM_001179189.1_JAY291 cds-NP_011926.1_JAY291 99.2 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005414.1:213877-214269:+ gene-YHR059W_MUCL30387 rna-NM_001179189.1_MUCL30387 cds-NP_011926.1_MUCL30387 99.2 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005446.1:213759-214151:+ gene-YHR059W_MUCL30388 rna-NM_001179189.1_MUCL30388 cds-NP_011926.1_MUCL30388 99.2 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005286.1:205758-206150:+ gene-YHR059W_MUCL39482 rna-NM_001179189.1_MUCL39482 cds-NP_011926.1_MUCL39482 99.7 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005430.1:212664-213056:+ gene-YHR059W_MUCL42920 rna-NM_001179189.1_MUCL42920 cds-NP_011926.1_MUCL42920 100.0 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011817.1:219990-220382:+ gene-YHR059W_NCIM3186 rna-NM_001179189.1_NCIM3186 cds-NP_011926.1_NCIM3186 99.4 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005274.1:677399-677791:+ gene-YHR059W_NCYC1407 rna-NM_001179189.1_NCYC1407 cds-NP_011926.1_NCYC1407 99.7 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994147.1:207961-208353:+ gene-YHR059W_PE2H3 rna-NM_001179189.1_PE2H3 cds-NP_011926.1_PE2H3 99.2 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999879.1:215408-215800:+ gene-YHR059W_PE2H4 rna-NM_001179189.1_PE2H4 cds-NP_011926.1_PE2H4 99.2 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001140.6:220108-220500:+ gene-YHR059W_S288C rna-NM_001179189.1_S288C cds-NP_011926.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000014.1:138941-139333:- gene-YHR059W_SA1 rna-NM_001179189.1_SA1 cds-NP_011926.1_SA1 99.7 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005494.1:207932-208324:+ gene-YHR059W_ThermosaccDry rna-NM_001179189.1_ThermosaccDry cds-NP_011926.1_ThermosaccDry 99.7 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005462.1:215571-215963:+ gene-YHR059W_VR1 rna-NM_001179189.1_VR1 cds-NP_011926.1_VR1 100.0 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000017.1:199485-199877:+ gene-YHR059W_ZTW1 rna-NM_001179189.1_ZTW1 cds-NP_011926.1_ZTW1 99.7 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047494.1:205028-205420:+ gene-YHR059W_Sparadoxus rna-NM_001179189.1_Sparadoxus cds-NP_011926.1_Sparadoxus 89.6 99.4 Verified 1 1 1 False True False False False

Additional files