FSH3 (YOR280C)


Gene profile

Gene name: FSH3
Reference locus (S288C): YOR280C
Gene biotype: protein_coding

Description: Family of serine hydrolases 3; Putative serine hydrolase; likely target of Cyc8p-Tup1p-Rfx1p transcriptional regulation; sequence is similar to S. cerevisiae Fsh1p and Fsh2p and the human candidate tumor suppressor OVCA2

Top 10 interactors (score): DFR1 (0.957); YLR345W (0.748); MRL1 (0.716); HUG1 (0.711); RFX1 (0.698); DPH1 (0.69); LCB3 (0.615); LDH1 (0.613); BNI4 (0.611); ICE2 (0.61); FSH1 (0.578); ALG1 (0.575); YIP3 (0.574); USE1 (0.568); SEC20 (0.561); DPH2 (0.549); IFA38 (0.53); APQ12 (0.526); NDE2 (0.525); NTH2 (0.499)

Homologues (species, bitscore): OVCA2 (Homo sapiens, 86.7); Ovca2 (Mus musculus, 82.4); ovca2 (Danio rerio, 87.8); ovca2 (Xenopus tropicalis, 96.3); CG5412 (Drosophila melanogaster, 65.5); C25G4.2 (Caenorhabditis elegans, 85.9); AT1G09280 (Arabidopsis thaliana, 83.6)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005309.1:835802-836602:- gene-YOR280C_AKU4011 rna-NM_001183699.1_AKU4011 cds-NP_014923.1_AKU4011 99.8 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000123.1:237765-238565:- gene-YOR280C_BG1 rna-NM_001183699.1_BG1 cds-NP_014923.1_BG1 99.7 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005517.1:821235-822035:- gene-YOR280C_Bruggeman rna-NM_001183699.1_Bruggeman cds-NP_014923.1_Bruggeman 99.8 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005533.1:821906-822706:- gene-YOR280C_CAT1 rna-NM_001183699.1_CAT1 cds-NP_014923.1_CAT1 99.7 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005373.1:818820-819620:- gene-YOR280C_CBS1585 rna-NM_001183699.1_CBS1585 cds-NP_014923.1_CBS1585 99.8 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005357.1:817467-818267:- gene-YOR280C_CBS436 rna-NM_001183699.1_CBS436 cds-NP_014923.1_CBS436 99.5 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005341.1:815673-816473:- gene-YOR280C_CBS6412 rna-NM_001183699.1_CBS6412 cds-NP_014923.1_CBS6412 99.8 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005325.1:824531-825331:- gene-YOR280C_CBS6413 rna-NM_001183699.1_CBS6413 cds-NP_014923.1_CBS6413 99.8 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001536.1:844762-845562:- gene-YOR280C_CENPK1137D rna-NM_001183699.1_CENPK1137D cds-NP_014923.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005485.1:811929-812729:- gene-YOR280C_EthanolRed rna-NM_001183699.1_EthanolRed cds-NP_014923.1_EthanolRed 99.7 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005549.1:817328-818128:- gene-YOR280C_FaliES1 rna-NM_001183699.1_FaliES1 cds-NP_014923.1_FaliES1 99.7 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000381.1:8788-9588:+ gene-YOR280C_JAY291 rna-NM_001183699.1_JAY291 cds-NP_014923.1_JAY291 99.7 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005421.1:825472-826272:- gene-YOR280C_MUCL30387 rna-NM_001183699.1_MUCL30387 cds-NP_014923.1_MUCL30387 99.7 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005453.1:833449-834249:- gene-YOR280C_MUCL30388 rna-NM_001183699.1_MUCL30388 cds-NP_014923.1_MUCL30388 99.7 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005293.1:826166-826966:- gene-YOR280C_MUCL39482 rna-NM_001183699.1_MUCL39482 cds-NP_014923.1_MUCL39482 100.0 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005437.1:835651-836451:- gene-YOR280C_MUCL42920 rna-NM_001183699.1_MUCL42920 cds-NP_014923.1_MUCL42920 99.8 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011824.1:844881-845681:- gene-YOR280C_NCIM3186 rna-NM_001183699.1_NCIM3186 cds-NP_014923.1_NCIM3186 99.8 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005277.1:826371-827171:- gene-YOR280C_NCYC1407 rna-NM_001183699.1_NCYC1407 cds-NP_014923.1_NCYC1407 99.8 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994154.1:825447-826247:- gene-YOR280C_PE2H3 rna-NM_001183699.1_PE2H3 cds-NP_014923.1_PE2H3 99.7 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999886.1:835824-836624:- gene-YOR280C_PE2H4 rna-NM_001183699.1_PE2H4 cds-NP_014923.1_PE2H4 99.7 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001147.6:844992-845792:- gene-YOR280C_S288C rna-NM_001183699.1_S288C cds-NP_014923.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000006.1:255008-255808:- gene-YOR280C_SA1 rna-NM_001183699.1_SA1 cds-NP_014923.1_SA1 99.7 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005501.1:816511-817311:- gene-YOR280C_ThermosaccDry rna-NM_001183699.1_ThermosaccDry cds-NP_014923.1_ThermosaccDry 99.7 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005469.1:879887-880687:- gene-YOR280C_VR1 rna-NM_001183699.1_VR1 cds-NP_014923.1_VR1 99.7 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000032.1:549399-550199:- gene-YOR280C_ZTW1 rna-NM_001183699.1_ZTW1 cds-NP_014923.1_ZTW1 99.8 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047501.1:822167-822967:- gene-YOR280C_Sparadoxus rna-NM_001183699.1_Sparadoxus cds-NP_014923.1_Sparadoxus 88.0 100.0 Verified 1 1 1 False True False False False

Additional files