FRM2 (YCL026C-A)


Gene profile

Gene name: FRM2
Reference locus (S288C): YCL026C-A
Gene biotype: protein_coding

Description: Fatty acid repression mutant protein 2; Type II nitroreductase, using NADH as reductant; mutants are defective in fatty acid mediated repression of genes involved in fatty acid biosynthesis indicative of a role in lipid signaling; involved in the oxidative stress response; transcription induction by cadmium and selenite indicates a possible role in the metal stress response; expression induced in cells treated with the mycotoxin patulin

Top 10 interactors (score): YLL056C (0.765); FLR1 (0.747); GTT2 (0.656); AAD16 (0.602); SNG1 (0.597); TRR2 (0.596); ECM4 (0.582); CIS1 (0.573); TRR1 (0.572); SRX1 (0.569); GPX2 (0.568); YCR102C (0.545); AAD4 (0.539); CAD1 (0.525); TMN3 (0.499); PUG1 (0.482); ATR1 (0.471); LOT6 (0.462); HVG1 (0.454); APD1 (0.454)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005297.1:76066-76647:- gene-YCL026C-A_AKU4011 rna-NM_001178713.1_AKU4011 cds-NP_009904.2_AKU4011 100.0 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000178.1:70463-71044:+ gene-YCL026C-A_BG1 rna-NM_001178713.1_BG1 cds-NP_009904.2_BG1 99.8 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005505.1:64256-64837:- gene-YCL026C-A_Bruggeman rna-NM_001178713.1_Bruggeman cds-NP_009904.2_Bruggeman 99.8 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005521.1:75873-76454:- gene-YCL026C-A_CAT1 rna-NM_001178713.1_CAT1 cds-NP_009904.2_CAT1 99.6 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005361.1:76714-77295:- gene-YCL026C-A_CBS1585 rna-NM_001178713.1_CBS1585 cds-NP_009904.2_CBS1585 100.0 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005345.1:75197-75778:- gene-YCL026C-A_CBS436 rna-NM_001178713.1_CBS436 cds-NP_009904.2_CBS436 98.9 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005329.1:64164-64745:- gene-YCL026C-A_CBS6412 rna-NM_001178713.1_CBS6412 cds-NP_009904.2_CBS6412 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005313.1:75531-76112:- gene-YCL026C-A_CBS6413 rna-NM_001178713.1_CBS6413 cds-NP_009904.2_CBS6413 100.0 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001524.1:74301-74882:- gene-YCL026C-A_CENPK1137D rna-NM_001178713.1_CENPK1137D cds-NP_009904.2_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005473.1:74084-74665:- gene-YCL026C-A_EthanolRed rna-NM_001178713.1_EthanolRed cds-NP_009904.2_EthanolRed 100.0 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005537.1:75044-75625:- gene-YCL026C-A_FaliES1 rna-NM_001178713.1_FaliES1 cds-NP_009904.2_FaliES1 100.0 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000225.1:8795-9376:+ gene-YCL026C-A_JAY291 rna-NM_001178713.1_JAY291 cds-NP_009904.2_JAY291 99.3 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005409.1:62436-63017:- gene-YCL026C-A_MUCL30387 rna-NM_001178713.1_MUCL30387 cds-NP_009904.2_MUCL30387 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005441.1:62721-63302:- gene-YCL026C-A_MUCL30388 rna-NM_001178713.1_MUCL30388 cds-NP_009904.2_MUCL30388 99.8 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005281.1:77130-77711:- gene-YCL026C-A_MUCL39482 rna-NM_001178713.1_MUCL39482 cds-NP_009904.2_MUCL39482 100.0 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005425.1:63243-63824:- gene-YCL026C-A_MUCL42920 rna-NM_001178713.1_MUCL42920 cds-NP_009904.2_MUCL42920 99.8 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011812.1:74336-74917:- gene-YCL026C-A_NCIM3186 rna-NM_001178713.1_NCIM3186 cds-NP_009904.2_NCIM3186 99.1 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005265.1:77614-78195:- gene-YCL026C-A_NCYC1407 rna-NM_001178713.1_NCYC1407 cds-NP_009904.2_NCYC1407 100.0 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994142.1:75135-75716:- gene-YCL026C-A_PE2H3 rna-NM_001178713.1_PE2H3 cds-NP_009904.2_PE2H3 99.3 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999874.1:75092-75673:- gene-YCL026C-A_PE2H4 rna-NM_001178713.1_PE2H4 cds-NP_009904.2_PE2H4 99.3 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001135.5:74704-75285:- gene-YCL026C-A_S288C rna-NM_001178713.1_S288C cds-NP_009904.2_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000061.1:61834-62415:- gene-YCL026C-A_SA1 rna-NM_001178713.1_SA1 cds-NP_009904.2_SA1 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005489.1:75345-75926:- gene-YCL026C-A_ThermosaccDry rna-NM_001178713.1_ThermosaccDry cds-NP_009904.2_ThermosaccDry 100.0 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005457.1:81623-82204:- gene-YCL026C-A_VR1 rna-NM_001178713.1_VR1 cds-NP_009904.2_VR1 99.4 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000004.1:75540-76121:- gene-YCL026C-A_ZTW1 rna-NM_001178713.1_ZTW1 cds-NP_009904.2_ZTW1 100.0 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047489.1:105073-105654:- gene-YCL026C-A_Sparadoxus rna-NM_001178713.1_Sparadoxus cds-NP_009904.2_Sparadoxus 89.8 100.0 Verified 1 1 1 False True False False False

Additional files