FRE3 (YOR381W)


Gene profile

Gene name: FRE3
Reference locus (S288C): YOR381W
Gene biotype: protein_coding

Description: Ferric reductase transmembrane component 3; Ferric reductase; reduces siderophore-bound iron prior to uptake by transporters; expression induced by low iron levels; Belongs to the ferric reductase (FRE) family

Top 10 interactors (score): FRE8 (0.85); AFT1 (0.784); FET3 (0.782); FIT2 (0.776); ARN1 (0.772); FIT3 (0.763); ARN2 (0.717); FTH1 (0.689); MAC1 (0.671); FTR1 (0.664); FIT1 (0.653); HMX1 (0.632); FET5 (0.623); CTR3 (0.547); SIT1 (0.534); ENB1 (0.532); ECM15 (0.507); CFT1 (0.494); NCP1 (0.493); LAC1 (0.469)

Homologues (species, bitscore): DUOX2 (Homo sapiens, 56.6); Duox2 (Mus musculus, 59.7); duox-2 (Caenorhabditis elegans, 53.1); FRO8 (Arabidopsis thaliana, 75.1)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005309.1:1042068-1044203:+ gene-YOR381W_AKU4011 rna-NM_001183801.1_AKU4011 cds-NP_015026.1_AKU4011 98.6 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000183.1:17222-19358:- gene-YOR381W_BG1 rna-NM_001183801.1_BG1 cds-NP_015026.1_BG1 99.8 100.0 Unannotated 1 1 0 False False False True False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005517.1:1026974-1029110:+ gene-YOR381W_Bruggeman rna-NM_001183801.1_Bruggeman cds-NP_015026.1_Bruggeman 99.8 100.0 Unannotated 1 1 0 False False False True False
CAT1 GCA_001738705.1 Bioethanol South America CM005533.1:1027611-1029747:+ gene-YOR381W_CAT1 rna-NM_001183801.1_CAT1 cds-NP_015026.1_CAT1 99.8 100.0 Unannotated 1 1 0 False False False True False
CBS1585 GCA_001738375.1 Sake Asia CM005373.1:1026479-1028607:+ gene-YOR381W_CBS1585 rna-NM_001183801.1_CBS1585 cds-NP_015026.1_CBS1585 98.4 99.6 Unannotated 1 1 0 False False False True False
CBS436 GCA_001738355.1 Sake Asia CM005357.1:1021360-1023495:+ gene-YOR381W_CBS436 rna-NM_001183801.1_CBS436 cds-NP_015026.1_CBS436 99.9 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005339.1:255416-257551:+ gene-YOR381W_CBS6412 rna-NM_001183801.1_CBS6412 cds-NP_015026.1_CBS6412 98.6 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005325.1:1030755-1032890:+ gene-YOR381W_CBS6413 rna-NM_001183801.1_CBS6413 cds-NP_015026.1_CBS6413 98.6 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001536.1:1055401-1057536:+ gene-YOR381W_CENPK1137D rna-NM_001183801.1_CENPK1137D cds-NP_015026.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005472.1:270598-272733:+ gene-YOR381W_EthanolRed rna-NM_001183801.1_EthanolRed cds-NP_015026.1_EthanolRed 98.6 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005549.1:1023606-1025741:+ gene-YOR381W_FaliES1 rna-NM_001183801.1_FaliES1 cds-NP_015026.1_FaliES1 98.6 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000354.1:12991-15127:- gene-YOR381W_JAY291 rna-NM_001183801.1_JAY291 cds-NP_015026.1_JAY291 99.9 100.0 Unannotated 1 1 0 False False False True False
MUCL30387 GCA_001738515.1 Bread Europe CM005421.1:1036272-1038656:+ gene-YOR381W_MUCL30387 rna-NM_001183801.1_MUCL30387 cds-NP_015026.1_MUCL30387 89.3 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005453.1:1044298-1046434:+ gene-YOR381W_MUCL30388 rna-NM_001183801.1_MUCL30388 cds-NP_015026.1_MUCL30388 86.9 100.0 Unannotated 1 1 0 False False False True False
MUCL39482 GCA_001738235.1 Sake Asia CM005293.1:1032999-1035134:+ gene-YOR381W_MUCL39482 rna-NM_001183801.1_MUCL39482 cds-NP_015026.1_MUCL39482 98.6 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005437.1:1040690-1042826:+ gene-YOR381W_MUCL42920 rna-NM_001183801.1_MUCL42920 cds-NP_015026.1_MUCL42920 99.7 100.0 Unannotated 1 1 0 False False False True False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011824.1:1055434-1057569:+ gene-YOR381W_NCIM3186 rna-NM_001183801.1_NCIM3186 cds-NP_015026.1_NCIM3186 99.7 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005277.1:1034018-1036146:+ gene-YOR381W_NCYC1407 rna-NM_001183801.1_NCYC1407 cds-NP_015026.1_NCYC1407 98.4 99.6 Unannotated 1 1 0 False False False True False
PE2H3 GCA_905220325.1 Bioethanol South America HG994154.1:1035347-1037483:+ gene-YOR381W_PE2H3 rna-NM_001183801.1_PE2H3 cds-NP_015026.1_PE2H3 99.9 100.0 Unannotated 1 1 0 False False False True False
PE2H4 GCA_905220315.1 Bioethanol South America LR999886.1:1051698-1053834:+ gene-YOR381W_PE2H4 rna-NM_001183801.1_PE2H4 cds-NP_015026.1_PE2H4 99.9 100.0 Unannotated 1 1 0 False False False True False
S288C GCF_000146045.2 Laboratory Not applicable NC_001147.6:1055545-1057680:+ gene-YOR381W_S288C rna-NM_001183801.1_S288C cds-NP_015026.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000016.1:160076-162211:+ gene-YOR381W_SA1 rna-NM_001183801.1_SA1 cds-NP_015026.1_SA1 98.7 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005501.1:1022788-1024923:+ gene-YOR381W_ThermosaccDry rna-NM_001183801.1_ThermosaccDry cds-NP_015026.1_ThermosaccDry 98.6 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005469.1:1084363-1086498:+ gene-YOR381W_VR1 rna-NM_001183801.1_VR1 cds-NP_015026.1_VR1 99.8 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000032.1:755515-757650:+ gene-YOR381W_ZTW1 rna-NM_001183801.1_ZTW1 cds-NP_015026.1_ZTW1 98.6 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047501.1:1030224-1032359:+ gene-YOR381W_Sparadoxus rna-NM_001183801.1_Sparadoxus cds-NP_015026.1_Sparadoxus 89.3 99.9 Verified 1 1 1 False True False False False

Additional files