Gene name: FRA1
Reference locus (S288C): YLL029W
Gene biotype: protein_coding
Description: Putative Xaa-Pro aminopeptidase FRA1; Protein involved in negative regulation of iron regulon transcription; forms an iron independent complex with Fra2p, Grx3p, and Grx4p; cytosolic; mutant fails to repress transcription of iron regulon and is defective in spore formation; Belongs to the peptidase M24B family
Top 10 interactors (score): BOL2 (0.982); APE4 (0.982); RKI1 (0.964); APE1 (0.915); GRX4 (0.915); YJL132W (0.9); GRX3 (0.87); TSA2 (0.815); AFT2 (0.768); AFT1 (0.754); RRT7 (0.71); CCT3 (0.684); SIZ1 (0.672); SSQ1 (0.653); RUP1 (0.653); ICP55 (0.652); SUP45 (0.601); CCC1 (0.599); APE2 (0.59); AAP1 (0.59)
Homologues (species, bitscore): XPNPEP1 (Homo sapiens, 430.3); Xpnpep1 (Mus musculus, 432.2); xpnpep1 (Danio rerio, 436.4); xpnpep2 (Xenopus tropicalis, 366.7); ApepP (Drosophila melanogaster, 447.2); app-1 (Caenorhabditis elegans, 349.7); AT3G05350 (Arabidopsis thaliana, 425.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:68619-70868:+ | gene-YLL029W_AKU4011 | rna-NM_001181849.1_AKU4011 | cds-NP_013071.1_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000212.1:32571-34820:+ | gene-YLL029W_BG1 | rna-NM_001181849.1_BG1 | cds-NP_013071.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:78878-81127:+ | gene-YLL029W_Bruggeman | rna-NM_001181849.1_Bruggeman | cds-NP_013071.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:79494-81743:+ | gene-YLL029W_CAT1 | rna-NM_001181849.1_CAT1 | cds-NP_013071.1_CAT1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:76319-78568:+ | gene-YLL029W_CBS1585 | rna-NM_001181849.1_CBS1585 | cds-NP_013071.1_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:66521-68770:+ | gene-YLL029W_CBS436 | rna-NM_001181849.1_CBS436 | cds-NP_013071.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:76215-78464:+ | gene-YLL029W_CBS6412 | rna-NM_001181849.1_CBS6412 | cds-NP_013071.1_CBS6412 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:76317-78566:+ | gene-YLL029W_CBS6413 | rna-NM_001181849.1_CBS6413 | cds-NP_013071.1_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:66468-68717:+ | gene-YLL029W_CENPK1137D | rna-NM_001181849.1_CENPK1137D | cds-NP_013071.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:69019-71268:+ | gene-YLL029W_EthanolRed | rna-NM_001181849.1_EthanolRed | cds-NP_013071.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:68332-70581:+ | gene-YLL029W_FaliES1 | rna-NM_001181849.1_FaliES1 | cds-NP_013071.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000118.1:8424-10673:- | gene-YLL029W_JAY291 | rna-NM_001181849.1_JAY291 | cds-NP_013071.1_JAY291 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:76290-78539:+ | gene-YLL029W_MUCL30387 | rna-NM_001181849.1_MUCL30387 | cds-NP_013071.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:81018-83267:+ | gene-YLL029W_MUCL30388 | rna-NM_001181849.1_MUCL30388 | cds-NP_013071.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:76528-78777:+ | gene-YLL029W_MUCL39482 | rna-NM_001181849.1_MUCL39482 | cds-NP_013071.1_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:76631-78880:+ | gene-YLL029W_MUCL42920 | rna-NM_001181849.1_MUCL42920 | cds-NP_013071.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:81435-83684:+ | gene-YLL029W_NCIM3186 | rna-NM_001181849.1_NCIM3186 | cds-NP_013071.1_NCIM3186 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:68394-70643:+ | gene-YLL029W_NCYC1407 | rna-NM_001181849.1_NCYC1407 | cds-NP_013071.1_NCYC1407 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:75081-77330:+ | gene-YLL029W_PE2H3 | rna-NM_001181849.1_PE2H3 | cds-NP_013071.1_PE2H3 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:74891-77140:+ | gene-YLL029W_PE2H4 | rna-NM_001181849.1_PE2H4 | cds-NP_013071.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:81461-83710:+ | gene-YLL029W_S288C | rna-NM_001181849.1_S288C | cds-NP_013071.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000047.1:74996-77245:+ | gene-YLL029W_SA1 | rna-NM_001181849.1_SA1 | cds-NP_013071.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:68838-71087:+ | gene-YLL029W_ThermosaccDry | rna-NM_001181849.1_ThermosaccDry | cds-NP_013071.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:82902-85151:+ | gene-YLL029W_VR1 | rna-NM_001181849.1_VR1 | cds-NP_013071.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000023.1:68388-70637:+ | gene-YLL029W_ZTW1 | rna-NM_001181849.1_ZTW1 | cds-NP_013071.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:76978-79227:+ | gene-YLL029W_Sparadoxus | rna-NM_001181849.1_Sparadoxus | cds-NP_013071.1_Sparadoxus | 90.1 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |