Gene name: FOB1
Reference locus (S288C): YDR110W
Gene biotype: protein_coding
Description: Nucleolar protein that binds the rDNA replication fork barrier site; required for replication fork blocking, recombinational hotspot activity, condensin recruitment to replication fork barrier (RFB), and rDNA repeat segregation; related to retroviral integrases
Top 10 interactors (score): SIR2 (0.997); NET1 (0.996); SPO12 (0.99); TOF2 (0.972); CDC14 (0.957); RRM3 (0.929); LRS4 (0.884); TOF1 (0.877); NSI1 (0.874); CSM1 (0.857); TOP1 (0.844); SGS1 (0.843); SMC2 (0.804); DNA2 (0.796); REB1 (0.794); TOP2 (0.779); SLK19 (0.779); NUR1 (0.779); CSM3 (0.772); NOP53 (0.768)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:647032-648732:+ | gene-YDR110W_AKU4011 | rna-NM_001180418.1_AKU4011 | cds-NP_010395.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000080.1:476140-477840:- | gene-YDR110W_BG1 | rna-NM_001180418.1_BG1 | cds-NP_010395.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:679120-680820:+ | gene-YDR110W_Bruggeman | rna-NM_001180418.1_Bruggeman | cds-NP_010395.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:665786-667486:+ | gene-YDR110W_CAT1 | rna-NM_001180418.1_CAT1 | cds-NP_010395.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:638050-639750:+ | gene-YDR110W_CBS1585 | rna-NM_001180418.1_CBS1585 | cds-NP_010395.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:663954-665654:+ | gene-YDR110W_CBS436 | rna-NM_001180418.1_CBS436 | cds-NP_010395.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:634430-636130:+ | gene-YDR110W_CBS6412 | rna-NM_001180418.1_CBS6412 | cds-NP_010395.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:663487-665187:+ | gene-YDR110W_CBS6413 | rna-NM_001180418.1_CBS6413 | cds-NP_010395.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:668514-670214:+ | gene-YDR110W_CENPK1137D | rna-NM_001180418.1_CENPK1137D | cds-NP_010395.1_CENPK1137D | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:648815-650515:+ | gene-YDR110W_EthanolRed | rna-NM_001180418.1_EthanolRed | cds-NP_010395.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:655609-657309:+ | gene-YDR110W_FaliES1 | rna-NM_001180418.1_FaliES1 | cds-NP_010395.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000002.1:7707-9407:+ | gene-YDR110W_JAY291 | rna-NM_001180418.1_JAY291 | cds-NP_010395.1_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:665032-666732:+ | gene-YDR110W_MUCL30387 | rna-NM_001180418.1_MUCL30387 | cds-NP_010395.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:654050-655750:+ | gene-YDR110W_MUCL30388 | rna-NM_001180418.1_MUCL30388 | cds-NP_010395.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:639419-641119:+ | gene-YDR110W_MUCL39482 | rna-NM_001180418.1_MUCL39482 | cds-NP_010395.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:577370-579070:+ | gene-YDR110W_MUCL42920 | rna-NM_001180418.1_MUCL42920 | cds-NP_010395.1_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:676025-677725:+ | gene-YDR110W_NCIM3186 | rna-NM_001180418.1_NCIM3186 | cds-NP_010395.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:638822-640522:+ | gene-YDR110W_NCYC1407 | rna-NM_001180418.1_NCYC1407 | cds-NP_010395.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:658143-659843:+ | gene-YDR110W_PE2H3 | rna-NM_001180418.1_PE2H3 | cds-NP_010395.1_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:657448-659148:+ | gene-YDR110W_PE2H4 | rna-NM_001180418.1_PE2H4 | cds-NP_010395.1_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:676102-677802:+ | gene-YDR110W_S288C | rna-NM_001180418.1_S288C | cds-NP_010395.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000009.1:24759-26459:+ | gene-YDR110W_SA1 | rna-NM_001180418.1_SA1 | cds-NP_010395.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:655138-656838:+ | gene-YDR110W_ThermosaccDry | rna-NM_001180418.1_ThermosaccDry | cds-NP_010395.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:668406-670106:+ | gene-YDR110W_VR1 | rna-NM_001180418.1_VR1 | cds-NP_010395.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000006.1:652720-654420:+ | gene-YDR110W_ZTW1 | rna-NM_001180418.1_ZTW1 | cds-NP_010395.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:657175-658866:+ | gene-YDR110W_Sparadoxus | rna-NM_001180418.1_Sparadoxus | cds-NP_010395.1_Sparadoxus | 87.7 | 98.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |