Gene name: FMT1
Reference locus (S288C): YBL013W
Gene biotype: protein_coding
Description: Methionyl-tRNA formyltransferase, mitochondrial; Methionyl-tRNA formyltransferase; catalyzes the formylation of initiator Met-tRNA in mitochondria; potential Cdc28p substrate
Top 10 interactors (score): MIS1 (0.978); DFR1 (0.959); ADE8 (0.953); GCV1 (0.951); SHM1 (0.945); SHM2 (0.945); IFM1 (0.945); MSM1 (0.939); MES1 (0.937); ADE3 (0.936); MOD5 (0.921); FRS2 (0.835); RSM28 (0.833); MRPS28 (0.821); SPC97 (0.818); SGD1 (0.806); MRPS17 (0.782); RSM10 (0.781); MRPL38 (0.758); TRP3 (0.749)
Homologues (species, bitscore): MTFMT (Homo sapiens, 92.8); Mtfmt (Mus musculus, 81.6); mtfmt (Danio rerio, 102.4); mtfmt (Xenopus tropicalis, 95.9); CG1750 (Drosophila melanogaster, 107.1); pde194 (Arabidopsis thaliana, 58.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:196160-197365:+ | gene-YBL013W_AKU4011 | rna-NM_001178253.1_AKU4011 | cds-NP_009540.2_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:186499-187704:+ | gene-YBL013W_BG1 | rna-NM_001178253.1_BG1 | cds-NP_009540.2_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:196797-198002:+ | gene-YBL013W_Bruggeman | rna-NM_001178253.1_Bruggeman | cds-NP_009540.2_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:199358-200563:+ | gene-YBL013W_CAT1 | rna-NM_001178253.1_CAT1 | cds-NP_009540.2_CAT1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:188475-189680:+ | gene-YBL013W_CBS1585 | rna-NM_001178253.1_CBS1585 | cds-NP_009540.2_CBS1585 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:196672-197877:+ | gene-YBL013W_CBS436 | rna-NM_001178253.1_CBS436 | cds-NP_009540.2_CBS436 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:286948-288153:+ | gene-YBL013W_CBS6412 | rna-NM_001178253.1_CBS6412 | cds-NP_009540.2_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:193796-195001:+ | gene-YBL013W_CBS6413 | rna-NM_001178253.1_CBS6413 | cds-NP_009540.2_CBS6413 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:195826-197031:+ | gene-YBL013W_CENPK1137D | rna-NM_001178253.1_CENPK1137D | cds-NP_009540.2_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:323370-324575:+ | gene-YBL013W_EthanolRed | rna-NM_001178253.1_EthanolRed | cds-NP_009540.2_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:210971-212176:+ | gene-YBL013W_FaliES1 | rna-NM_001178253.1_FaliES1 | cds-NP_009540.2_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000048.1:84907-86112:- | gene-YBL013W_JAY291 | rna-NM_001178253.1_JAY291 | cds-NP_009540.2_JAY291 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:197434-198639:+ | gene-YBL013W_MUCL30387 | rna-NM_001178253.1_MUCL30387 | cds-NP_009540.2_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:197404-198609:+ | gene-YBL013W_MUCL30388 | rna-NM_001178253.1_MUCL30388 | cds-NP_009540.2_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:188411-189616:+ | gene-YBL013W_MUCL39482 | rna-NM_001178253.1_MUCL39482 | cds-NP_009540.2_MUCL39482 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:195840-197045:+ | gene-YBL013W_MUCL42920 | rna-NM_001178253.1_MUCL42920 | cds-NP_009540.2_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:201853-203058:+ | gene-YBL013W_NCIM3186 | rna-NM_001178253.1_NCIM3186 | cds-NP_009540.2_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:189560-190765:+ | gene-YBL013W_NCYC1407 | rna-NM_001178253.1_NCYC1407 | cds-NP_009540.2_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:201745-202950:+ | gene-YBL013W_PE2H3 | rna-NM_001178253.1_PE2H3 | cds-NP_009540.2_PE2H3 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:199389-200594:+ | gene-YBL013W_PE2H4 | rna-NM_001178253.1_PE2H4 | cds-NP_009540.2_PE2H4 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:202056-203261:+ | gene-YBL013W_S288C | rna-NM_001178253.1_S288C | cds-NP_009540.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000037.1:93606-94811:- | gene-YBL013W_SA1 | rna-NM_001178253.1_SA1 | cds-NP_009540.2_SA1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:210926-212131:+ | gene-YBL013W_ThermosaccDry | rna-NM_001178253.1_ThermosaccDry | cds-NP_009540.2_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:193083-194288:+ | gene-YBL013W_VR1 | rna-NM_001178253.1_VR1 | cds-NP_009540.2_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:187143-188348:+ | gene-YBL013W_ZTW1 | rna-NM_001178253.1_ZTW1 | cds-NP_009540.2_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:222743-223948:+ | gene-YBL013W_Sparadoxus | rna-NM_001178253.1_Sparadoxus | cds-NP_009540.2_Sparadoxus | 85.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |