Gene name: FMS1
Reference locus (S288C): YMR020W
Gene biotype: protein_coding
Description: Polyamine oxidase; converts spermine to spermidine, which is required for the essential hypusination modification of translation factor eIF-5A; also involved in pantothenic acid biosynthesis; Belongs to the flavin monoamine oxidase family
Top 10 interactors (score): SPE3 (0.98); ALD2 (0.973); ALD5 (0.972); SPE1 (0.962); ALD3 (0.96); HFD1 (0.95); SPE4 (0.937); SPS19 (0.932); ALD6 (0.929); CTT1 (0.918); HOS1 (0.916); RPD3 (0.916); HOS2 (0.916); PXP1 (0.915); STE23 (0.914); ALD4 (0.914); CAT2 (0.91); NCP1 (0.909); FOX2 (0.909); PCD1 (0.905)
Homologues (species, bitscore): PAOX (Homo sapiens, 92.0); Paox (Mus musculus, 92.8); zgc:66484 (Danio rerio, 110.5); LOC100145496 (Xenopus tropicalis, 117.1); CG8032 (Drosophila melanogaster, 100.1); hpo-15 (Caenorhabditis elegans, 78.2); PAO3 (Arabidopsis thaliana, 112.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:364984-366510:+ | gene-YMR020W_AKU4011 | rna-NM_001182516.1_AKU4011 | cds-NP_013733.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000201.1:176348-177874:- | gene-YMR020W_BG1 | rna-NM_001182516.1_BG1 | cds-NP_013733.1_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:304922-306448:+ | gene-YMR020W_Bruggeman | rna-NM_001182516.1_Bruggeman | cds-NP_013733.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:307435-308961:+ | gene-YMR020W_CAT1 | rna-NM_001182516.1_CAT1 | cds-NP_013733.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:297923-299449:+ | gene-YMR020W_CBS1585 | rna-NM_001182516.1_CBS1585 | cds-NP_013733.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:303466-304992:+ | gene-YMR020W_CBS436 | rna-NM_001182516.1_CBS436 | cds-NP_013733.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:411327-412853:+ | gene-YMR020W_CBS6412 | rna-NM_001182516.1_CBS6412 | cds-NP_013733.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:297181-298707:+ | gene-YMR020W_CBS6413 | rna-NM_001182516.1_CBS6413 | cds-NP_013733.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:310108-311634:+ | gene-YMR020W_CENPK1137D | rna-NM_001182516.1_CENPK1137D | cds-NP_013733.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:297755-299281:+ | gene-YMR020W_EthanolRed | rna-NM_001182516.1_EthanolRed | cds-NP_013733.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:300938-302464:+ | gene-YMR020W_FaliES1 | rna-NM_001182516.1_FaliES1 | cds-NP_013733.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000033.1:134479-136005:- | gene-YMR020W_JAY291 | rna-NM_001182516.1_JAY291 | cds-NP_013733.1_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:302883-304409:+ | gene-YMR020W_MUCL30387 | rna-NM_001182516.1_MUCL30387 | cds-NP_013733.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:307308-308834:+ | gene-YMR020W_MUCL30388 | rna-NM_001182516.1_MUCL30388 | cds-NP_013733.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:298208-299734:+ | gene-YMR020W_MUCL39482 | rna-NM_001182516.1_MUCL39482 | cds-NP_013733.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:304023-305549:+ | gene-YMR020W_MUCL42920 | rna-NM_001182516.1_MUCL42920 | cds-NP_013733.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:315331-316857:+ | gene-YMR020W_NCIM3186 | rna-NM_001182516.1_NCIM3186 | cds-NP_013733.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:298125-299651:+ | gene-YMR020W_NCYC1407 | rna-NM_001182516.1_NCYC1407 | cds-NP_013733.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:304067-305593:+ | gene-YMR020W_PE2H3 | rna-NM_001182516.1_PE2H3 | cds-NP_013733.1_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:310162-311688:+ | gene-YMR020W_PE2H4 | rna-NM_001182516.1_PE2H4 | cds-NP_013733.1_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:315377-316903:+ | gene-YMR020W_S288C | rna-NM_001182516.1_S288C | cds-NP_013733.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000005.1:221363-222889:- | gene-YMR020W_SA1 | rna-NM_001182516.1_SA1 | cds-NP_013733.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:298007-299533:+ | gene-YMR020W_ThermosaccDry | rna-NM_001182516.1_ThermosaccDry | cds-NP_013733.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:301955-303481:+ | gene-YMR020W_VR1 | rna-NM_001182516.1_VR1 | cds-NP_013733.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:277022-278548:+ | gene-YMR020W_ZTW1 | rna-NM_001182516.1_ZTW1 | cds-NP_013733.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:310802-312328:+ | gene-YMR020W_Sparadoxus | rna-NM_001182516.1_Sparadoxus | cds-NP_013733.1_Sparadoxus | 88.3 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |