Gene name: FMP52
Reference locus (S288C): YER004W
Gene biotype: protein_coding
Description: Protein FMP52, mitochondrial; Protein of unknown function; localized to the mitochondrial outer membrane; induced by treatment with 8-methoxypsoralen and UVA irradiation; Belongs to the FMP52 family
Top 10 interactors (score): ALG14 (0.869); COX6 (0.771); RIP1 (0.766); CYT1 (0.764); RNR2 (0.749); ACP1 (0.731); DIN7 (0.708); ATP3 (0.702); COR1 (0.683); TRM3 (0.682); CUS2 (0.656); ATP5 (0.653); RPA34 (0.634); MRPL32 (0.62); CYM1 (0.619); DUN1 (0.618); RAD54 (0.612); DOS2 (0.604); RNR4 (0.601); COX12 (0.592)
Homologues (species, bitscore): HTATIP2 (Homo sapiens, 78.6); Htatip2 (Mus musculus, 77.4); htatip2 (Danio rerio, 80.1); htatip2 (Xenopus tropicalis, 81.6); C33F10.14 (Caenorhabditis elegans, 105.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005299.1:153270-153965:+ | gene-YER004W_AKU4011 | rna-NM_001178895.1_AKU4011 | cds-NP_010919.1_AKU4011 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000011.1:271717-272412:- | gene-YER004W_BG1 | rna-NM_001178895.1_BG1 | cds-NP_010919.1_BG1 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005507.1:160957-161652:+ | gene-YER004W_Bruggeman | rna-NM_001178895.1_Bruggeman | cds-NP_010919.1_Bruggeman | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005523.1:156188-156883:+ | gene-YER004W_CAT1 | rna-NM_001178895.1_CAT1 | cds-NP_010919.1_CAT1 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005363.1:153579-154274:+ | gene-YER004W_CBS1585 | rna-NM_001178895.1_CBS1585 | cds-NP_010919.1_CBS1585 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005347.1:154847-155542:+ | gene-YER004W_CBS436 | rna-NM_001178895.1_CBS436 | cds-NP_010919.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005331.1:153473-154168:+ | gene-YER004W_CBS6412 | rna-NM_001178895.1_CBS6412 | cds-NP_010919.1_CBS6412 | 98.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005315.1:158119-158814:+ | gene-YER004W_CBS6413 | rna-NM_001178895.1_CBS6413 | cds-NP_010919.1_CBS6413 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001526.1:157406-158101:+ | gene-YER004W_CENPK1137D | rna-NM_001178895.1_CENPK1137D | cds-NP_010919.1_CENPK1137D | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005475.1:153934-154629:+ | gene-YER004W_EthanolRed | rna-NM_001178895.1_EthanolRed | cds-NP_010919.1_EthanolRed | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005539.1:154194-154889:+ | gene-YER004W_FaliES1 | rna-NM_001178895.1_FaliES1 | cds-NP_010919.1_FaliES1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000024.1:21164-21859:+ | gene-YER004W_JAY291 | rna-NM_001178895.1_JAY291 | cds-NP_010919.1_JAY291 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005411.1:157493-158188:+ | gene-YER004W_MUCL30387 | rna-NM_001178895.1_MUCL30387 | cds-NP_010919.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005443.1:154015-154710:+ | gene-YER004W_MUCL30388 | rna-NM_001178895.1_MUCL30388 | cds-NP_010919.1_MUCL30388 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005283.1:152615-153310:+ | gene-YER004W_MUCL39482 | rna-NM_001178895.1_MUCL39482 | cds-NP_010919.1_MUCL39482 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005427.1:158487-159182:+ | gene-YER004W_MUCL42920 | rna-NM_001178895.1_MUCL42920 | cds-NP_010919.1_MUCL42920 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011814.1:159579-160274:+ | gene-YER004W_NCIM3186 | rna-NM_001178895.1_NCIM3186 | cds-NP_010919.1_NCIM3186 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005267.1:157689-158384:+ | gene-YER004W_NCYC1407 | rna-NM_001178895.1_NCYC1407 | cds-NP_010919.1_NCYC1407 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994144.1:161990-162685:+ | gene-YER004W_PE2H3 | rna-NM_001178895.1_PE2H3 | cds-NP_010919.1_PE2H3 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999876.1:157905-158600:+ | gene-YER004W_PE2H4 | rna-NM_001178895.1_PE2H4 | cds-NP_010919.1_PE2H4 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001137.3:159580-160275:+ | gene-YER004W_S288C | rna-NM_001178895.1_S288C | cds-NP_010919.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000020.1:83334-84029:- | gene-YER004W_SA1 | rna-NM_001178895.1_SA1 | cds-NP_010919.1_SA1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005491.1:154600-155295:+ | gene-YER004W_ThermosaccDry | rna-NM_001178895.1_ThermosaccDry | cds-NP_010919.1_ThermosaccDry | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005459.1:154081-154776:+ | gene-YER004W_VR1 | rna-NM_001178895.1_VR1 | cds-NP_010919.1_VR1 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000009.1:152629-153324:+ | gene-YER004W_ZTW1 | rna-NM_001178895.1_ZTW1 | cds-NP_010919.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047491.1:157338-158033:+ | gene-YER004W_Sparadoxus | rna-NM_001178895.1_Sparadoxus | cds-NP_010919.1_Sparadoxus | 89.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |