FMP45 (YDL222C)


Gene profile

Gene name: FMP45
Reference locus (S288C): YDL222C
Gene biotype: protein_coding

Description: SUR7 family protein FMP45; Integral membrane protein localized to mitochondria; required for sporulation and maintaining sphingolipid content; similar to SUR7; FMP45 has a paralog, YNL194C, that arose from the whole genome duplication

Top 10 interactors (score): HBT1 (0.983); CTT1 (0.943); TKL2 (0.941); MSC1 (0.925); RTN2 (0.922); NQM1 (0.922); PHM7 (0.919); YNL194C (0.919); HXT5 (0.915); ALD3 (0.908); GRE1 (0.908); YNL195C (0.904); DDR2 (0.904); FMP16 (0.887); YBR116C (0.879); FHN1 (0.864); NCE102 (0.853); SOL4 (0.85); RTC3 (0.838); GAD1 (0.813)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005298.1:44360-45289:- gene-YDL222C_AKU4011 rna-NM_001180282.1_AKU4011 cds-NP_010059.1_AKU4011 99.4 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000077.1:21777-22706:+ gene-YDL222C_BG1 rna-NM_001180282.1_BG1 cds-NP_010059.1_BG1 99.8 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005506.1:60042-60971:- gene-YDL222C_Bruggeman rna-NM_001180282.1_Bruggeman cds-NP_010059.1_Bruggeman 99.4 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005532.1:279890-280819:- gene-YDL222C_CAT1 rna-NM_001180282.1_CAT1 cds-NP_010059.1_CAT1 99.8 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005362.1:43235-44164:- gene-YDL222C_CBS1585 rna-NM_001180282.1_CBS1585 cds-NP_010059.1_CBS1585 99.4 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005356.1:258121-259050:- gene-YDL222C_CBS436 rna-NM_001180282.1_CBS436 cds-NP_010059.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005330.1:43347-44276:- gene-YDL222C_CBS6412 rna-NM_001180282.1_CBS6412 cds-NP_010059.1_CBS6412 99.4 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005314.1:60870-61799:- gene-YDL222C_CBS6413 rna-NM_001180282.1_CBS6413 cds-NP_010059.1_CBS6413 99.4 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001525.1:59538-60467:- gene-YDL222C_CENPK1137D rna-NM_001180282.1_CENPK1137D cds-NP_010059.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005474.1:56808-57737:- gene-YDL222C_EthanolRed rna-NM_001180282.1_EthanolRed cds-NP_010059.1_EthanolRed 99.3 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005538.1:61135-62064:- gene-YDL222C_FaliES1 rna-NM_001180282.1_FaliES1 cds-NP_010059.1_FaliES1 99.3 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000213.1:15465-16394:- gene-YDL222C_JAY291 rna-NM_001180282.1_JAY291 cds-NP_010059.1_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005410.1:58989-59918:- gene-YDL222C_MUCL30387 rna-NM_001180282.1_MUCL30387 cds-NP_010059.1_MUCL30387 99.3 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005452.1:266807-267736:- gene-YDL222C_MUCL30388 rna-NM_001180282.1_MUCL30388 cds-NP_010059.1_MUCL30388 99.3 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005282.1:44078-45007:- gene-YDL222C_MUCL39482 rna-NM_001180282.1_MUCL39482 cds-NP_010059.1_MUCL39482 99.4 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005426.1:60139-61068:- gene-YDL222C_MUCL42920 rna-NM_001180282.1_MUCL42920 cds-NP_010059.1_MUCL42920 100.0 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011813.1:60795-61724:- gene-YDL222C_NCIM3186 rna-NM_001180282.1_NCIM3186 cds-NP_010059.1_NCIM3186 99.4 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005266.1:44035-44964:- gene-YDL222C_NCYC1407 rna-NM_001180282.1_NCYC1407 cds-NP_010059.1_NCYC1407 99.4 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994143.1:51078-52007:- gene-YDL222C_PE2H3 rna-NM_001180282.1_PE2H3 cds-NP_010059.1_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999875.1:51088-52017:- gene-YDL222C_PE2H4 rna-NM_001180282.1_PE2H4 cds-NP_010059.1_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001136.10:60872-61801:- gene-YDL222C_S288C rna-NM_001180282.1_S288C cds-NP_010059.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000094.1:15273-16202:- gene-YDL222C_SA1 rna-NM_001180282.1_SA1 cds-NP_010059.1_SA1 99.8 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005490.1:60890-61819:- gene-YDL222C_ThermosaccDry rna-NM_001180282.1_ThermosaccDry cds-NP_010059.1_ThermosaccDry 99.3 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005458.1:61845-62774:- gene-YDL222C_VR1 rna-NM_001180282.1_VR1 cds-NP_010059.1_VR1 99.8 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000006.1:60058-60987:- gene-YDL222C_ZTW1 rna-NM_001180282.1_ZTW1 cds-NP_010059.1_ZTW1 99.2 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047490.1:63476-64405:- gene-YDL222C_Sparadoxus rna-NM_001180282.1_Sparadoxus cds-NP_010059.1_Sparadoxus 90.8 100.0 Verified 1 1 1 False True False False False

Additional files