Gene name: FMP42
Reference locus (S288C): YMR221C
Gene biotype: protein_coding
Description: Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; physical interaction with Atg27p suggests a possible role in autophagy
Top 10 interactors (score): COT1 (0.774); YML018C (0.75); VBA4 (0.704); YGR021W (0.7); MRX3 (0.694); YNL320W (0.694); VPS73 (0.671); YJR039W (0.67); PKP2 (0.616); YOL162W (0.587); YJL163C (0.584); UTR5 (0.575); CBR1 (0.573); MTF1 (0.572); MSK1 (0.564); RML2 (0.561); RSM18 (0.53); PET122 (0.526); PDX1 (0.525); VMA13 (0.518)
Homologues (species, bitscore): SLC43A1 (Homo sapiens, 85.1); Slc43a3 (Mus musculus, 81.6); slc43a3a (Danio rerio, 86.3); slc43a2 (Xenopus tropicalis, 73.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:753837-755351:- | gene-YMR221C_AKU4011 | rna-NM_001182728.1_AKU4011 | cds-NP_013948.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000069.1:199256-200771:+ | gene-YMR221C_BG1 | rna-NM_001182728.1_BG1 | cds-NP_013948.1_BG1 | 99.8 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:698066-699580:- | gene-YMR221C_Bruggeman | rna-NM_001182728.1_Bruggeman | cds-NP_013948.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:701940-703454:- | gene-YMR221C_CAT1 | rna-NM_001182728.1_CAT1 | cds-NP_013948.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:686098-687612:- | gene-YMR221C_CBS1585 | rna-NM_001182728.1_CBS1585 | cds-NP_013948.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:690367-691881:- | gene-YMR221C_CBS436 | rna-NM_001182728.1_CBS436 | cds-NP_013948.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:797659-799173:- | gene-YMR221C_CBS6412 | rna-NM_001182728.1_CBS6412 | cds-NP_013948.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:685250-686764:- | gene-YMR221C_CBS6413 | rna-NM_001182728.1_CBS6413 | cds-NP_013948.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:708636-710150:- | gene-YMR221C_CENPK1137D | rna-NM_001182728.1_CENPK1137D | cds-NP_013948.1_CENPK1137D | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:746304-747818:- | gene-YMR221C_EthanolRed | rna-NM_001182728.1_EthanolRed | cds-NP_013948.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:691956-693470:- | gene-YMR221C_FaliES1 | rna-NM_001182728.1_FaliES1 | cds-NP_013948.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000141.1:92566-94080:+ | gene-YMR221C_JAY291 | rna-NM_001182728.1_JAY291 | cds-NP_013948.1_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:691849-693363:- | gene-YMR221C_MUCL30387 | rna-NM_001182728.1_MUCL30387 | cds-NP_013948.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:699077-700591:- | gene-YMR221C_MUCL30388 | rna-NM_001182728.1_MUCL30388 | cds-NP_013948.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:687168-688682:- | gene-YMR221C_MUCL39482 | rna-NM_001182728.1_MUCL39482 | cds-NP_013948.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:694512-696026:- | gene-YMR221C_MUCL42920 | rna-NM_001182728.1_MUCL42920 | cds-NP_013948.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:713885-715399:- | gene-YMR221C_NCIM3186 | rna-NM_001182728.1_NCIM3186 | cds-NP_013948.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:686824-688338:- | gene-YMR221C_NCYC1407 | rna-NM_001182728.1_NCYC1407 | cds-NP_013948.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:696687-698201:- | gene-YMR221C_PE2H3 | rna-NM_001182728.1_PE2H3 | cds-NP_013948.1_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:697702-699216:- | gene-YMR221C_PE2H4 | rna-NM_001182728.1_PE2H4 | cds-NP_013948.1_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:713931-715445:- | gene-YMR221C_S288C | rna-NM_001182728.1_S288C | cds-NP_013948.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000002.1:92680-94194:+ | gene-YMR221C_SA1 | rna-NM_001182728.1_SA1 | cds-NP_013948.1_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:688127-689641:- | gene-YMR221C_ThermosaccDry | rna-NM_001182728.1_ThermosaccDry | cds-NP_013948.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:701210-702724:- | gene-YMR221C_VR1 | rna-NM_001182728.1_VR1 | cds-NP_013948.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000028.1:103833-105347:- | gene-YMR221C_ZTW1 | rna-NM_001182728.1_ZTW1 | cds-NP_013948.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:706074-707597:- | gene-YMR221C_Sparadoxus | rna-NM_001182728.1_Sparadoxus | cds-NP_013948.1_Sparadoxus | 87.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |