FMP41 (YNL168C)


Gene profile

Gene name: FMP41
Reference locus (S288C): YNL168C
Gene biotype: protein_coding

Description: Uncharacterized mitochondrial hydrolase FMP41; Putative protein of unknown function; GFP-fusion protein is induced in response to the DNA-damaging agent MMS; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies

Top 10 interactors (score): LIH1 (0.835); FUM1 (0.829); SDH1 (0.826); YJL045W (0.826); SDH2 (0.826); SDH3 (0.81); SHH3 (0.81); SDH4 (0.801); SHH4 (0.801); SRP40 (0.724); RPO21 (0.69); RPB4 (0.689); SFA1 (0.682); BYE1 (0.666); TRP3 (0.637); ALA1 (0.593); PHA2 (0.59); CRD1 (0.572); HIS6 (0.572); YHL018W (0.543)

Homologues (species, bitscore): FAHD1 (Homo sapiens, 154.1); Fahd1 (Mus musculus, 158.7); fahd1 (Danio rerio, 152.9); FAHD1 (Xenopus tropicalis, 163.3); CG5793 (Drosophila melanogaster, 122.9); ZK688.3 (Caenorhabditis elegans, 136.3); AT4G15940 (Arabidopsis thaliana, 158.7)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005308.1:311755-312534:- gene-YNL168C_AKU4011 rna-NM_001183006.1_AKU4011 cds-NP_014231.1_AKU4011 99.2 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000155.1:215721-216500:- gene-YNL168C_BG1 rna-NM_001183006.1_BG1 cds-NP_014231.1_BG1 99.8 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005516.1:321813-322592:- gene-YNL168C_Bruggeman rna-NM_001183006.1_Bruggeman cds-NP_014231.1_Bruggeman 99.8 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005532.1:364690-365469:- gene-YNL168C_CAT1 rna-NM_001183006.1_CAT1 cds-NP_014231.1_CAT1 100.0 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005372.1:312407-313186:- gene-YNL168C_CBS1585 rna-NM_001183006.1_CBS1585 cds-NP_014231.1_CBS1585 99.2 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005356.1:380728-381507:- gene-YNL168C_CBS436 rna-NM_001183006.1_CBS436 cds-NP_014231.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005340.1:307812-308591:- gene-YNL168C_CBS6412 rna-NM_001183006.1_CBS6412 cds-NP_014231.1_CBS6412 99.2 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005324.1:308840-309619:- gene-YNL168C_CBS6413 rna-NM_001183006.1_CBS6413 cds-NP_014231.1_CBS6413 99.2 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001535.1:311843-312622:- gene-YNL168C_CENPK1137D rna-NM_001183006.1_CENPK1137D cds-NP_014231.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005484.1:308728-309507:- gene-YNL168C_EthanolRed rna-NM_001183006.1_EthanolRed cds-NP_014231.1_EthanolRed 99.2 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005548.1:304641-305420:- gene-YNL168C_FaliES1 rna-NM_001183006.1_FaliES1 cds-NP_014231.1_FaliES1 99.2 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000260.1:13078-13857:+ gene-YNL168C_JAY291 rna-NM_001183006.1_JAY291 cds-NP_014231.1_JAY291 99.8 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005420.1:317631-318410:- gene-YNL168C_MUCL30387 rna-NM_001183006.1_MUCL30387 cds-NP_014231.1_MUCL30387 99.2 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005452.1:352185-352964:- gene-YNL168C_MUCL30388 rna-NM_001183006.1_MUCL30388 cds-NP_014231.1_MUCL30388 99.8 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005292.1:309646-310425:- gene-YNL168C_MUCL39482 rna-NM_001183006.1_MUCL39482 cds-NP_014231.1_MUCL39482 99.2 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005436.1:312052-312831:- gene-YNL168C_MUCL42920 rna-NM_001183006.1_MUCL42920 cds-NP_014231.1_MUCL42920 98.9 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011823.1:317999-318778:- gene-YNL168C_NCIM3186 rna-NM_001183006.1_NCIM3186 cds-NP_014231.1_NCIM3186 99.1 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005276.1:311740-312519:- gene-YNL168C_NCYC1407 rna-NM_001183006.1_NCYC1407 cds-NP_014231.1_NCYC1407 99.2 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994153.1:308702-309481:- gene-YNL168C_PE2H3 rna-NM_001183006.1_PE2H3 cds-NP_014231.1_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999885.1:308090-308869:- gene-YNL168C_PE2H4 rna-NM_001183006.1_PE2H4 cds-NP_014231.1_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001146.8:318030-318809:- gene-YNL168C_S288C rna-NM_001183006.1_S288C cds-NP_014231.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000018.1:94767-95546:+ gene-YNL168C_SA1 rna-NM_001183006.1_SA1 cds-NP_014231.1_SA1 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005500.1:305498-306277:- gene-YNL168C_ThermosaccDry rna-NM_001183006.1_ThermosaccDry cds-NP_014231.1_ThermosaccDry 99.2 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005468.1:324022-324801:- gene-YNL168C_VR1 rna-NM_001183006.1_VR1 cds-NP_014231.1_VR1 100.0 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000030.1:215320-216099:- gene-YNL168C_ZTW1 rna-NM_001183006.1_ZTW1 cds-NP_014231.1_ZTW1 99.7 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047500.1:316088-316867:- gene-YNL168C_Sparadoxus rna-NM_001183006.1_Sparadoxus cds-NP_014231.1_Sparadoxus 90.3 100.0 Verified 1 1 1 False True False False False

Additional files