Gene name: FMP40
Reference locus (S288C): YPL222W
Gene biotype: protein_coding
Description: Serine/tyrosine/threonine adenylyltransferase; UPF0061 protein FMP40; Putative protein of unknown function; proposed to be involved in responding to environmental stresses; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; Belongs to the UPF0061 (SELO) family
Top 10 interactors (score): YPL222C-A (0.892); AIM17 (0.767); GOR1 (0.744); MXR1 (0.734); MXR2 (0.701); NAB3 (0.671); PAN3 (0.611); FLC1 (0.611); HBT1 (0.585); CPT1 (0.582); EPT1 (0.582); POS5 (0.571); SEN1 (0.566); GPX1 (0.561); YNL195C (0.558); NDE2 (0.538); CMC4 (0.526); YRO2 (0.526); GPX2 (0.524); HYR1 (0.521)
Homologues (species, bitscore): SELO (Homo sapiens, 199.5); Selo (Mus musculus, 214.5); selo (Danio rerio, 208.4); selo (Xenopus tropicalis, 220.7); AT5G13030 (Arabidopsis thaliana, 231.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:107942-110008:+ | gene-YPL222W_AKU4011 | rna-NM_001184036.1_AKU4011 | cds-NP_015102.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000069.1:313865-315931:+ | gene-YPL222W_BG1 | rna-NM_001184036.1_BG1 | cds-NP_015102.1_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:133139-135205:+ | gene-YPL222W_Bruggeman | rna-NM_001184036.1_Bruggeman | cds-NP_015102.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:130173-132239:+ | gene-YPL222W_CAT1 | rna-NM_001184036.1_CAT1 | cds-NP_015102.1_CAT1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:112253-114319:+ | gene-YPL222W_CBS1585 | rna-NM_001184036.1_CBS1585 | cds-NP_015102.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:126653-128719:+ | gene-YPL222W_CBS436 | rna-NM_001184036.1_CBS436 | cds-NP_015102.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:117420-119486:+ | gene-YPL222W_CBS6412 | rna-NM_001184036.1_CBS6412 | cds-NP_015102.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:108405-110471:+ | gene-YPL222W_CBS6413 | rna-NM_001184036.1_CBS6413 | cds-NP_015102.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:130090-132156:+ | gene-YPL222W_CENPK1137D | rna-NM_001184036.1_CENPK1137D | cds-NP_015102.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:107334-109400:+ | gene-YPL222W_EthanolRed | rna-NM_001184036.1_EthanolRed | cds-NP_015102.1_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:114141-116207:+ | gene-YPL222W_FaliES1 | rna-NM_001184036.1_FaliES1 | cds-NP_015102.1_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000069.1:41860-43926:- | gene-YPL222W_JAY291 | rna-NM_001184036.1_JAY291 | cds-NP_015102.1_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:124973-127039:+ | gene-YPL222W_MUCL30387 | rna-NM_001184036.1_MUCL30387 | cds-NP_015102.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:123412-125478:+ | gene-YPL222W_MUCL30388 | rna-NM_001184036.1_MUCL30388 | cds-NP_015102.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:105383-107449:+ | gene-YPL222W_MUCL39482 | rna-NM_001184036.1_MUCL39482 | cds-NP_015102.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:124245-126311:+ | gene-YPL222W_MUCL42920 | rna-NM_001184036.1_MUCL42920 | cds-NP_015102.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:130145-132211:+ | gene-YPL222W_NCIM3186 | rna-NM_001184036.1_NCIM3186 | cds-NP_015102.1_NCIM3186 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:111829-113895:+ | gene-YPL222W_NCYC1407 | rna-NM_001184036.1_NCYC1407 | cds-NP_015102.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:119547-121613:+ | gene-YPL222W_PE2H3 | rna-NM_001184036.1_PE2H3 | cds-NP_015102.1_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:119190-121256:+ | gene-YPL222W_PE2H4 | rna-NM_001184036.1_PE2H4 | cds-NP_015102.1_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:130162-132228:+ | gene-YPL222W_S288C | rna-NM_001184036.1_S288C | cds-NP_015102.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000056.1:72045-74111:+ | gene-YPL222W_SA1 | rna-NM_001184036.1_SA1 | cds-NP_015102.1_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:114142-116208:+ | gene-YPL222W_ThermosaccDry | rna-NM_001184036.1_ThermosaccDry | cds-NP_015102.1_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:354012-356078:+ | gene-YPL222W_VR1 | rna-NM_001184036.1_VR1 | cds-NP_015102.1_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:113683-115749:+ | gene-YPL222W_ZTW1 | rna-NM_001184036.1_ZTW1 | cds-NP_015102.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:115244-117310:+ | gene-YPL222W_Sparadoxus | rna-NM_001184036.1_Sparadoxus | cds-NP_015102.1_Sparadoxus | 87.6 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |