FMP30 (YPL103C)


Gene profile

Gene name: FMP30
Reference locus (S288C): YPL103C
Gene biotype: protein_coding

Description: N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D, mitochondrial; Protein with a role in maintaining mitochondrial morphology; also involved in maintaining normal cardiolipin levels; mitochondrial inner membrane protein; proposed to be involved in N-acylethanolamine metabolism; related to mammalian N-acylPE-specific phospholipase D; Belongs to the NAPE-PLD family

Top 10 interactors (score): AMD2 (0.914); YJU3 (0.891); PSD1 (0.879); MDM31 (0.849); SPO14 (0.824); MDM32 (0.813); CRD1 (0.801); YHR086W-A (0.77); YPL102C (0.717); PGC1 (0.709); MDM35 (0.7); PHB1 (0.698); UPS1 (0.686); GEM1 (0.667); YAF9 (0.628); GEP4 (0.628); IZH3 (0.626); UPS2 (0.625); MDM34 (0.619); AIM25 (0.617)

Homologues (species, bitscore): NAPEPLD (Homo sapiens, 180.3); Napepld (Mus musculus, 176.8); napepld (Danio rerio, 171.0); napepld (Xenopus tropicalis, 178.7); nape-2 (Caenorhabditis elegans, 175.6)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005310.1:335639-337045:- gene-YPL103C_AKU4011 rna-NM_001183917.1_AKU4011 cds-NP_015222.1_AKU4011 99.5 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000069.1:541396-542802:- gene-YPL103C_BG1 rna-NM_001183917.1_BG1 cds-NP_015222.1_BG1 99.5 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005518.1:361644-363050:- gene-YPL103C_Bruggeman rna-NM_001183917.1_Bruggeman cds-NP_015222.1_Bruggeman 99.5 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005534.1:358312-359718:- gene-YPL103C_CAT1 rna-NM_001183917.1_CAT1 cds-NP_015222.1_CAT1 99.6 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005374.1:339712-341118:- gene-YPL103C_CBS1585 rna-NM_001183917.1_CBS1585 cds-NP_015222.1_CBS1585 99.5 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005358.1:354387-355793:- gene-YPL103C_CBS436 rna-NM_001183917.1_CBS436 cds-NP_015222.1_CBS436 99.8 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005342.1:344381-345787:- gene-YPL103C_CBS6412 rna-NM_001183917.1_CBS6412 cds-NP_015222.1_CBS6412 99.5 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005326.1:336348-337754:- gene-YPL103C_CBS6413 rna-NM_001183917.1_CBS6413 cds-NP_015222.1_CBS6413 99.5 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001537.1:357948-359354:- gene-YPL103C_CENPK1137D rna-NM_001183917.1_CENPK1137D cds-NP_015222.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005486.1:334331-335737:- gene-YPL103C_EthanolRed rna-NM_001183917.1_EthanolRed cds-NP_015222.1_EthanolRed 99.3 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005550.1:341923-343329:- gene-YPL103C_FaliES1 rna-NM_001183917.1_FaliES1 cds-NP_015222.1_FaliES1 99.3 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000007.1:22487-23893:+ gene-YPL103C_JAY291 rna-NM_001183917.1_JAY291 cds-NP_015222.1_JAY291 99.2 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005422.1:352884-354290:- gene-YPL103C_MUCL30387 rna-NM_001183917.1_MUCL30387 cds-NP_015222.1_MUCL30387 99.4 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005454.1:351703-353109:- gene-YPL103C_MUCL30388 rna-NM_001183917.1_MUCL30388 cds-NP_015222.1_MUCL30388 99.5 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005294.1:333041-334447:- gene-YPL103C_MUCL39482 rna-NM_001183917.1_MUCL39482 cds-NP_015222.1_MUCL39482 99.5 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005438.1:390729-392135:- gene-YPL103C_MUCL42920 rna-NM_001183917.1_MUCL42920 cds-NP_015222.1_MUCL42920 99.4 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011825.1:357983-359389:- gene-YPL103C_NCIM3186 rna-NM_001183917.1_NCIM3186 cds-NP_015222.1_NCIM3186 99.1 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005278.1:339494-340900:- gene-YPL103C_NCYC1407 rna-NM_001183917.1_NCYC1407 cds-NP_015222.1_NCYC1407 99.5 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994155.1:346988-348394:- gene-YPL103C_PE2H3 rna-NM_001183917.1_PE2H3 cds-NP_015222.1_PE2H3 99.5 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999887.1:346611-348017:- gene-YPL103C_PE2H4 rna-NM_001183917.1_PE2H4 cds-NP_015222.1_PE2H4 99.5 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001148.4:358000-359406:- gene-YPL103C_S288C rna-NM_001183917.1_S288C cds-NP_015222.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000012.1:14273-15679:+ gene-YPL103C_SA1 rna-NM_001183917.1_SA1 cds-NP_015222.1_SA1 99.7 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005502.1:341721-343127:- gene-YPL103C_ThermosaccDry rna-NM_001183917.1_ThermosaccDry cds-NP_015222.1_ThermosaccDry 99.3 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005470.1:356700-358106:- gene-YPL103C_VR1 rna-NM_001183917.1_VR1 cds-NP_015222.1_VR1 99.6 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000033.1:341044-342450:- gene-YPL103C_ZTW1 rna-NM_001183917.1_ZTW1 cds-NP_015222.1_ZTW1 99.4 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047502.1:342723-344129:- gene-YPL103C_Sparadoxus rna-NM_001183917.1_Sparadoxus cds-NP_015222.1_Sparadoxus 90.0 100.0 Verified 1 1 1 False True False False False

Additional files