FMP23 (YBR047W)


Gene profile

Gene name: FMP23
Reference locus (S288C): YBR047W
Gene biotype: protein_coding

Description: Protein FMP23, mitochondrial; Putative protein of unknown function; proposed to be involved in iron or copper homeostasis; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies

Top 10 interactors (score): ZTA1 (0.845); YGL117W (0.826); TMT1 (0.814); SRL4 (0.695); YHR045W (0.692); SDS24 (0.691); ARN1 (0.676); YLR126C (0.671); YTP1 (0.658); SSU1 (0.597); AFT2 (0.596); PIR5 (0.585); AFT1 (0.574); SDD1 (0.574); HMX1 (0.571); YBL100W-A (0.57); MRS4 (0.568); YBL005W-A (0.562); VMR1 (0.56); FIT2 (0.553)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005296.1:314265-314792:+ gene-YBR047W_AKU4011 rna-NM_001178395.1_AKU4011 cds-NP_009603.1_AKU4011 99.8 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000179.1:304429-304956:+ gene-YBR047W_BG1 rna-NM_001178395.1_BG1 cds-NP_009603.1_BG1 99.4 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005504.1:314998-315525:+ gene-YBR047W_Bruggeman rna-NM_001178395.1_Bruggeman cds-NP_009603.1_Bruggeman 99.6 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005520.1:318689-319216:+ gene-YBR047W_CAT1 rna-NM_001178395.1_CAT1 cds-NP_009603.1_CAT1 99.6 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005360.1:306562-307089:+ gene-YBR047W_CBS1585 rna-NM_001178395.1_CBS1585 cds-NP_009603.1_CBS1585 99.8 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005344.1:314570-315097:+ gene-YBR047W_CBS436 rna-NM_001178395.1_CBS436 cds-NP_009603.1_CBS436 99.6 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005328.1:404779-405306:+ gene-YBR047W_CBS6412 rna-NM_001178395.1_CBS6412 cds-NP_009603.1_CBS6412 99.8 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005312.1:311679-312206:+ gene-YBR047W_CBS6413 rna-NM_001178395.1_CBS6413 cds-NP_009603.1_CBS6413 99.6 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001523.1:325593-326120:+ gene-YBR047W_CENPK1137D rna-NM_001178395.1_CENPK1137D cds-NP_009603.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005472.1:441039-441566:+ gene-YBR047W_EthanolRed rna-NM_001178395.1_EthanolRed cds-NP_009603.1_EthanolRed 99.8 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005536.1:330319-330846:+ gene-YBR047W_FaliES1 rna-NM_001178395.1_FaliES1 cds-NP_009603.1_FaliES1 99.8 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000441.1:1302-1829:- gene-YBR047W_JAY291 rna-NM_001178395.1_JAY291 cds-NP_009603.1_JAY291 99.6 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005408.1:316623-317150:+ gene-YBR047W_MUCL30387 rna-NM_001178395.1_MUCL30387 cds-NP_009603.1_MUCL30387 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005440.1:316407-316934:+ gene-YBR047W_MUCL30388 rna-NM_001178395.1_MUCL30388 cds-NP_009603.1_MUCL30388 99.6 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005280.1:306550-307077:+ gene-YBR047W_MUCL39482 rna-NM_001178395.1_MUCL39482 cds-NP_009603.1_MUCL39482 99.8 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005424.1:313748-314275:+ gene-YBR047W_MUCL42920 rna-NM_001178395.1_MUCL42920 cds-NP_009603.1_MUCL42920 99.6 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011811.1:331630-332157:+ gene-YBR047W_NCIM3186 rna-NM_001178395.1_NCIM3186 cds-NP_009603.1_NCIM3186 99.6 100.0 Verified 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005264.1:307462-307989:+ gene-YBR047W_NCYC1407 rna-NM_001178395.1_NCYC1407 cds-NP_009603.1_NCYC1407 99.8 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994141.1:319635-320162:+ gene-YBR047W_PE2H3 rna-NM_001178395.1_PE2H3 cds-NP_009603.1_PE2H3 99.6 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999873.1:317311-317838:+ gene-YBR047W_PE2H4 rna-NM_001178395.1_PE2H4 cds-NP_009603.1_PE2H4 99.6 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001134.8:331833-332360:+ gene-YBR047W_S288C rna-NM_001178395.1_S288C cds-NP_009603.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000017.1:145181-145708:- gene-YBR047W_SA1 rna-NM_001178395.1_SA1 cds-NP_009603.1_SA1 99.6 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005488.1:329330-329857:+ gene-YBR047W_ThermosaccDry rna-NM_001178395.1_ThermosaccDry cds-NP_009603.1_ThermosaccDry 99.8 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005456.1:311237-311764:+ gene-YBR047W_VR1 rna-NM_001178395.1_VR1 cds-NP_009603.1_VR1 99.6 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000003.1:305059-305586:+ gene-YBR047W_ZTW1 rna-NM_001178395.1_ZTW1 cds-NP_009603.1_ZTW1 100.0 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047488.1:341586-342115:+ gene-YBR047W_Sparadoxus rna-NM_001178395.1_Sparadoxus cds-NP_009603.1_Sparadoxus 89.6 100.0 Verified 1 1 1 False True False False False

Additional files