FMP16 (YDR070C)


Gene profile

Gene name: FMP16
Reference locus (S288C): YDR070C
Gene biotype: protein_coding

Description: Protein FMP16, mitochondrial; Protein of unknown function; may be involved in responding to conditions of stress; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; protein abundance increases in response to DNA replication stress

Top 10 interactors (score): MSC1 (0.992); SOL4 (0.969); YNL195C (0.959); OM45 (0.943); DDR2 (0.941); NQM1 (0.941); DCS2 (0.941); RTN2 (0.941); TFS1 (0.932); CTT1 (0.929); HXT5 (0.929); SIP18 (0.929); HSP26 (0.928); ALD3 (0.928); GAD1 (0.925); TKL2 (0.924); GPG1 (0.922); RTC3 (0.922); UIP4 (0.91); YJR096W (0.906)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005298.1:565648-565929:- gene-YDR070C_AKU4011 rna-NM_001180378.1_AKU4011 cds-NP_010355.1_AKU4011 98.9 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000080.1:559427-559708:+ gene-YDR070C_BG1 rna-NM_001180378.1_BG1 cds-NP_010355.1_BG1 100.0 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005506.1:597946-598227:- gene-YDR070C_Bruggeman rna-NM_001180378.1_Bruggeman cds-NP_010355.1_Bruggeman 98.9 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005522.1:581526-581807:- gene-YDR070C_CAT1 rna-NM_001180378.1_CAT1 cds-NP_010355.1_CAT1 100.0 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005362.1:556601-556882:- gene-YDR070C_CBS1585 rna-NM_001180378.1_CBS1585 cds-NP_010355.1_CBS1585 98.9 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005346.1:581775-582056:- gene-YDR070C_CBS436 rna-NM_001180378.1_CBS436 cds-NP_010355.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005330.1:553011-553292:- gene-YDR070C_CBS6412 rna-NM_001180378.1_CBS6412 cds-NP_010355.1_CBS6412 98.9 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005314.1:581678-581959:- gene-YDR070C_CBS6413 rna-NM_001180378.1_CBS6413 cds-NP_010355.1_CBS6413 98.9 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001525.1:587121-587402:- gene-YDR070C_CENPK1137D rna-NM_001180378.1_CENPK1137D cds-NP_010355.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005474.1:567463-567744:- gene-YDR070C_EthanolRed rna-NM_001180378.1_EthanolRed cds-NP_010355.1_EthanolRed 98.9 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005538.1:573954-574235:- gene-YDR070C_FaliES1 rna-NM_001180378.1_FaliES1 cds-NP_010355.1_FaliES1 98.9 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000358.1:56600-56881:+ gene-YDR070C_JAY291 rna-NM_001180378.1_JAY291 cds-NP_010355.1_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005410.1:582630-582911:- gene-YDR070C_MUCL30387 rna-NM_001180378.1_MUCL30387 cds-NP_010355.1_MUCL30387 98.9 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005442.1:573028-573309:- gene-YDR070C_MUCL30388 rna-NM_001180378.1_MUCL30388 cds-NP_010355.1_MUCL30388 98.9 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005282.1:557972-558253:- gene-YDR070C_MUCL39482 rna-NM_001180378.1_MUCL39482 cds-NP_010355.1_MUCL39482 98.9 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005426.1:488433-488714:- gene-YDR070C_MUCL42920 rna-NM_001180378.1_MUCL42920 cds-NP_010355.1_MUCL42920 98.9 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011813.1:588021-588302:- gene-YDR070C_NCIM3186 rna-NM_001180378.1_NCIM3186 cds-NP_010355.1_NCIM3186 98.9 100.0 Verified 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005266.1:556894-557175:- gene-YDR070C_NCYC1407 rna-NM_001180378.1_NCYC1407 cds-NP_010355.1_NCYC1407 98.9 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994143.1:576554-576835:- gene-YDR070C_PE2H3 rna-NM_001180378.1_PE2H3 cds-NP_010355.1_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999875.1:575859-576140:- gene-YDR070C_PE2H4 rna-NM_001180378.1_PE2H4 cds-NP_010355.1_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001136.10:588098-588379:- gene-YDR070C_S288C rna-NM_001180378.1_S288C cds-NP_010355.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000011.1:57092-57373:+ gene-YDR070C_SA1 rna-NM_001180378.1_SA1 cds-NP_010355.1_SA1 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005490.1:573596-573877:- gene-YDR070C_ThermosaccDry rna-NM_001180378.1_ThermosaccDry cds-NP_010355.1_ThermosaccDry 98.9 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005458.1:586351-586632:- gene-YDR070C_VR1 rna-NM_001180378.1_VR1 cds-NP_010355.1_VR1 100.0 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000006.1:571250-571531:- gene-YDR070C_ZTW1 rna-NM_001180378.1_ZTW1 cds-NP_010355.1_ZTW1 98.9 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047490.1:576119-576400:- gene-YDR070C_Sparadoxus rna-NM_001180378.1_Sparadoxus cds-NP_010355.1_Sparadoxus 89.0 100.0 Verified 1 1 1 False True False False False

Additional files