Gene name: FMN1
Reference locus (S288C): YDR236C
Gene biotype: protein_coding
Description: Riboflavin kinase, produces riboflavin monophosphate (FMN); FMN is a necessary cofactor for many enzymes; predominantly localizes to the microsomal fraction and also found in the mitochondrial inner membrane; human RFK functionally complements the lethality of the null mutation
Top 10 interactors (score): FAD1 (0.999); RIB5 (0.993); YMR178W (0.96); FLX1 (0.954); RIB7 (0.892); RIB3 (0.886); RIB4 (0.886); RIB1 (0.86); LTP1 (0.817); PHO12 (0.8); PHO11 (0.8); PHO5 (0.8); DIA3 (0.8); PHO3 (0.8); RIB2 (0.758); ACP1 (0.714); SMM1 (0.713); FRS2 (0.691); MCH5 (0.653); NPY1 (0.65)
Homologues (species, bitscore): RFK (Homo sapiens, 103.2); Rfk (Mus musculus, 101.7); rfk (Danio rerio, 100.1); rfk (Xenopus tropicalis, 104.0); CG2846 (Drosophila melanogaster, 100.9); R10H10.6 (Caenorhabditis elegans, 76.3); FMN/FHY (Arabidopsis thaliana, 99.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:891912-892568:- | gene-YDR236C_AKU4011 | rna-NM_001180544.1_AKU4011 | cds-NP_010522.1_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000080.1:233240-233896:+ | gene-YDR236C_BG1 | rna-NM_001180544.1_BG1 | cds-NP_010522.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:924238-924894:- | gene-YDR236C_Bruggeman | rna-NM_001180544.1_Bruggeman | cds-NP_010522.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:911524-912180:- | gene-YDR236C_CAT1 | rna-NM_001180544.1_CAT1 | cds-NP_010522.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:882261-882917:- | gene-YDR236C_CBS1585 | rna-NM_001180544.1_CBS1585 | cds-NP_010522.1_CBS1585 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:911291-911947:- | gene-YDR236C_CBS436 | rna-NM_001180544.1_CBS436 | cds-NP_010522.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:879021-879677:- | gene-YDR236C_CBS6412 | rna-NM_001180544.1_CBS6412 | cds-NP_010522.1_CBS6412 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:909623-910279:- | gene-YDR236C_CBS6413 | rna-NM_001180544.1_CBS6413 | cds-NP_010522.1_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:934166-934822:- | gene-YDR236C_CENPK1137D | rna-NM_001180544.1_CENPK1137D | cds-NP_010522.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:892645-893301:- | gene-YDR236C_EthanolRed | rna-NM_001180544.1_EthanolRed | cds-NP_010522.1_EthanolRed | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:900847-901503:- | gene-YDR236C_FaliES1 | rna-NM_001180544.1_FaliES1 | cds-NP_010522.1_FaliES1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000348.1:10091-10747:+ | gene-YDR236C_JAY291 | rna-NM_001180544.1_JAY291 | cds-NP_010522.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:910136-910792:- | gene-YDR236C_MUCL30387 | rna-NM_001180544.1_MUCL30387 | cds-NP_010522.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:898166-898822:- | gene-YDR236C_MUCL30388 | rna-NM_001180544.1_MUCL30388 | cds-NP_010522.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:883666-884322:- | gene-YDR236C_MUCL39482 | rna-NM_001180544.1_MUCL39482 | cds-NP_010522.1_MUCL39482 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:822941-823597:- | gene-YDR236C_MUCL42920 | rna-NM_001180544.1_MUCL42920 | cds-NP_010522.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:935159-935815:- | gene-YDR236C_NCIM3186 | rna-NM_001180544.1_NCIM3186 | cds-NP_010522.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:887334-887990:- | gene-YDR236C_NCYC1407 | rna-NM_001180544.1_NCYC1407 | cds-NP_010522.1_NCYC1407 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:903593-904249:- | gene-YDR236C_PE2H3 | rna-NM_001180544.1_PE2H3 | cds-NP_010522.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:908870-909526:- | gene-YDR236C_PE2H4 | rna-NM_001180544.1_PE2H4 | cds-NP_010522.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:935236-935892:- | gene-YDR236C_S288C | rna-NM_001180544.1_S288C | cds-NP_010522.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000013.1:141430-142086:- | gene-YDR236C_SA1 | rna-NM_001180544.1_SA1 | cds-NP_010522.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:899001-899657:- | gene-YDR236C_ThermosaccDry | rna-NM_001180544.1_ThermosaccDry | cds-NP_010522.1_ThermosaccDry | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:914193-914849:- | gene-YDR236C_VR1 | rna-NM_001180544.1_VR1 | cds-NP_010522.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000007.1:161683-162339:- | gene-YDR236C_ZTW1 | rna-NM_001180544.1_ZTW1 | cds-NP_010522.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:903870-904526:- | gene-YDR236C_Sparadoxus | rna-NM_001180544.1_Sparadoxus | cds-NP_010522.1_Sparadoxus | 88.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |