Gene name: FLO1
Reference locus (S288C): YAR050W
Gene biotype: protein_coding
Description: Lectin-like protein involved in flocculation; cell wall protein that binds mannose chains on the surface of other cells, confers floc-forming ability that is chymotrypsin sensitive and heat resistant; important for co-flocculation with other yeasts, mediating interaction with specific species; FLO1 has a paralog, FLO5, that arose from a segmental duplication; Belongs to the flocculin family
Top 10 interactors (score): FLO11 (0.941); FLO8 (0.85); SAG1 (0.83); SUC2 (0.78); CWP2 (0.76); AGA1 (0.76); MSS11 (0.749); AGA2 (0.747); CYC8 (0.747); TUP1 (0.747); SFL1 (0.711); GAL2 (0.711); GTS1 (0.71); TIR1 (0.71); PHO11 (0.698); CWP1 (0.693); AMN1 (0.692); SED1 (0.618); URA3 (0.615); KRE1 (0.572)
Homologues (species, bitscore): arhgap30 (Xenopus tropicalis, 53.1); shot (Drosophila melanogaster, 77.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000141.1:1656-5292:- | gene-YAR050W_BG1 | rna-NM_001178230.1_BG1 | cds-NP_009424.1_BG1 | 51.0 | 70.7 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | MBVY01000022.1:6-1483:- | gene-YAR050W_Bruggeman | rna-NM_001178230.1_Bruggeman | cds-NP_009424.1_Bruggeman | 24.0 | 27.9 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005519.1:9444-12665:- | gene-YAR050W_CAT1 | rna-NM_001178230.1_CAT1 | cds-NP_009424.1_CAT1 | 51.7 | 63.6 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005343.1:22561-24093:- | gene-YAR050W_CBS436 | rna-NM_001178230.1_CBS436 | cds-NP_009424.1_CBS436 | 25.8 | 29.4 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005535.1:206414-209865:+ | gene-YAR050W_FaliES1 | rna-NM_001178230.1_FaliES1 | cds-NP_009424.1_FaliES1 | 58.5 | 67.8 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000253.1:2-531:- | gene-YAR050W_JAY291 | rna-NM_001178230.1_JAY291 | cds-NP_009424.1_JAY291 | 9.6 | 11.4 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | MBVV01000273.1:229-1716:+ | gene-YAR050W_MUCL42920 | rna-NM_001178230.1_MUCL42920 | cds-NP_009424.1_MUCL42920 | 23.9 | 27.8 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011810.1:203280-207893:+ | gene-YAR050W_NCIM3186 | rna-NM_001178230.1_NCIM3186 | cds-NP_009424.1_NCIM3186 | 73.1 | 86.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001133.9:203403-208016:+ | gene-YAR050W_S288C | rna-NM_001178230.1_S288C | cds-NP_009424.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000147.1:3-1808:+ | gene-YAR050W_SA1 | rna-NM_001178230.1_SA1 | cds-NP_009424.1_SA1 | 36.5 | 38.8 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:417180-417637:+ | gene-YAR050W_ThermosaccDry | rna-NM_001178230.1_ThermosaccDry | cds-NP_009424.1_ThermosaccDry | 9.8 | 9.9 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:511967-517477:+ | gene-YAR050W_Sparadoxus | rna-NM_001178230.1_Sparadoxus | cds-NP_009424.1_Sparadoxus | 63.8 | 94.8 | Verified | 1 | 1 | 0 | False | False | True | False | False |