Gene name: FLC3
Reference locus (S288C): YGL139W
Gene biotype: protein_coding
Description: Putative flavin carrier protein 3; Putative FAD transporter, similar to Flc1p and Flc2p; localized to the ER; FLC3 has a paralog, FLC1, that arose from the whole genome duplication
Top 10 interactors (score): YGL140C (0.929); RRT6 (0.865); YDL183C (0.75); SWM2 (0.698); EFM6 (0.697); GPI10 (0.697); HUL5 (0.695); PXR1 (0.61); PHO86 (0.6); DCK1 (0.575); CST26 (0.573); ROG1 (0.571); PSK1 (0.568); PHO91 (0.526); HIP1 (0.526); SAP4 (0.525); ECM22 (0.525); ARO2 (0.521); PIR1 (0.52); FLC2 (0.487)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:248279-250687:+ | gene-YGL139W_AKU4011 | rna-NM_001181004.3_AKU4011 | cds-NP_011376.3_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000132.1:154240-156648:- | gene-YGL139W_BG1 | rna-NM_001181004.3_BG1 | cds-NP_011376.3_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:250731-253139:+ | gene-YGL139W_Bruggeman | rna-NM_001181004.3_Bruggeman | cds-NP_011376.3_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:246319-248727:+ | gene-YGL139W_CAT1 | rna-NM_001181004.3_CAT1 | cds-NP_011376.3_CAT1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:251661-254069:+ | gene-YGL139W_CBS1585 | rna-NM_001181004.3_CBS1585 | cds-NP_011376.3_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:246277-248679:+ | gene-YGL139W_CBS436 | rna-NM_001181004.3_CBS436 | cds-NP_011376.3_CBS436 | 99.7 | 99.7 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:237871-240279:+ | gene-YGL139W_CBS6412 | rna-NM_001181004.3_CBS6412 | cds-NP_011376.3_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:246217-248625:+ | gene-YGL139W_CBS6413 | rna-NM_001181004.3_CBS6413 | cds-NP_011376.3_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:245975-248383:+ | gene-YGL139W_CENPK1137D | rna-NM_001181004.3_CENPK1137D | cds-NP_011376.3_CENPK1137D | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:238450-240858:+ | gene-YGL139W_EthanolRed | rna-NM_001181004.3_EthanolRed | cds-NP_011376.3_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:239696-242104:+ | gene-YGL139W_FaliES1 | rna-NM_001181004.3_FaliES1 | cds-NP_011376.3_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000090.1:89523-91931:+ | gene-YGL139W_JAY291 | rna-NM_001181004.3_JAY291 | cds-NP_011376.3_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:247701-250109:+ | gene-YGL139W_MUCL30387 | rna-NM_001181004.3_MUCL30387 | cds-NP_011376.3_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:250819-253227:+ | gene-YGL139W_MUCL30388 | rna-NM_001181004.3_MUCL30388 | cds-NP_011376.3_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:248442-250850:+ | gene-YGL139W_MUCL39482 | rna-NM_001181004.3_MUCL39482 | cds-NP_011376.3_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:251693-254101:+ | gene-YGL139W_MUCL42920 | rna-NM_001181004.3_MUCL42920 | cds-NP_011376.3_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:245716-248124:+ | gene-YGL139W_NCIM3186 | rna-NM_001181004.3_NCIM3186 | cds-NP_011376.3_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:239932-242340:+ | gene-YGL139W_NCYC1407 | rna-NM_001181004.3_NCYC1407 | cds-NP_011376.3_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:241822-244230:+ | gene-YGL139W_PE2H3 | rna-NM_001181004.3_PE2H3 | cds-NP_011376.3_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:246820-249228:+ | gene-YGL139W_PE2H4 | rna-NM_001181004.3_PE2H4 | cds-NP_011376.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:245716-248124:+ | gene-YGL139W_S288C | rna-NM_001181004.3_S288C | cds-NP_011376.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000081.1:6623-9031:- | gene-YGL139W_SA1 | rna-NM_001181004.3_SA1 | cds-NP_011376.3_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:239925-242333:+ | gene-YGL139W_ThermosaccDry | rna-NM_001181004.3_ThermosaccDry | cds-NP_011376.3_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:246736-249144:+ | gene-YGL139W_VR1 | rna-NM_001181004.3_VR1 | cds-NP_011376.3_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000014.1:238002-240410:+ | gene-YGL139W_ZTW1 | rna-NM_001181004.3_ZTW1 | cds-NP_011376.3_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:244039-246447:+ | gene-YGL139W_Sparadoxus | rna-NM_001181004.3_Sparadoxus | cds-NP_011376.3_Sparadoxus | 91.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |