Gene name: FLC2
Reference locus (S288C): YAL053W
Gene biotype: protein_coding
Description: Flavin carrier protein 2; Putative calcium channel involved in calcium release under hypotonic stress; required for uptake of FAD into endoplasmic reticulum; involved in cell wall maintenance; FLC2 has a paralog, YOR365C, that arose from the whole genome duplication
Top 10 interactors (score): KRE1 (0.763); KRE5 (0.728); TCB3 (0.71); GAS1 (0.693); DRS2 (0.681); FKS1 (0.68); PRE8 (0.662); PDR5 (0.655); YBL028C (0.654); FLC1 (0.652); YVC1 (0.65); MRX12 (0.572); RCM1 (0.569); RRT14 (0.569); YGR283C (0.565); OLA1 (0.553); SGT2 (0.537); HOC1 (0.535); SSK2 (0.53); YSP3 (0.526)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005295.1:31046-33397:+ | gene-YAL053W_AKU4011 | rna-NM_001178196.2_AKU4011 | cds-NP_009348.2_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000070.1:18114-20465:+ | gene-YAL053W_BG1 | rna-NM_001178196.2_BG1 | cds-NP_009348.2_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005503.1:45501-47852:+ | gene-YAL053W_Bruggeman | rna-NM_001178196.2_Bruggeman | cds-NP_009348.2_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005519.1:31766-34117:+ | gene-YAL053W_CAT1 | rna-NM_001178196.2_CAT1 | cds-NP_009348.2_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005359.1:44067-46418:+ | gene-YAL053W_CBS1585 | rna-NM_001178196.2_CBS1585 | cds-NP_009348.2_CBS1585 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005343.1:44307-46658:+ | gene-YAL053W_CBS436 | rna-NM_001178196.2_CBS436 | cds-NP_009348.2_CBS436 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005327.1:30212-32563:+ | gene-YAL053W_CBS6412 | rna-NM_001178196.2_CBS6412 | cds-NP_009348.2_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005311.1:42330-44681:+ | gene-YAL053W_CBS6413 | rna-NM_001178196.2_CBS6413 | cds-NP_009348.2_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001522.1:45955-48306:+ | gene-YAL053W_CENPK1137D | rna-NM_001178196.2_CENPK1137D | cds-NP_009348.2_CENPK1137D | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005471.1:32460-34811:+ | gene-YAL053W_EthanolRed | rna-NM_001178196.2_EthanolRed | cds-NP_009348.2_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005535.1:46402-48753:+ | gene-YAL053W_FaliES1 | rna-NM_001178196.2_FaliES1 | cds-NP_009348.2_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000084.1:18353-20704:+ | gene-YAL053W_JAY291 | rna-NM_001178196.2_JAY291 | cds-NP_009348.2_JAY291 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005407.1:47006-49357:+ | gene-YAL053W_MUCL30387 | rna-NM_001178196.2_MUCL30387 | cds-NP_009348.2_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005439.1:43550-45901:+ | gene-YAL053W_MUCL30388 | rna-NM_001178196.2_MUCL30388 | cds-NP_009348.2_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005279.1:42871-45222:+ | gene-YAL053W_MUCL39482 | rna-NM_001178196.2_MUCL39482 | cds-NP_009348.2_MUCL39482 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005423.1:45211-47562:+ | gene-YAL053W_MUCL42920 | rna-NM_001178196.2_MUCL42920 | cds-NP_009348.2_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011810.1:45776-48127:+ | gene-YAL053W_NCIM3186 | rna-NM_001178196.2_NCIM3186 | cds-NP_009348.2_NCIM3186 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005263.1:30736-33087:+ | gene-YAL053W_NCYC1407 | rna-NM_001178196.2_NCYC1407 | cds-NP_009348.2_NCYC1407 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994140.1:32615-34966:+ | gene-YAL053W_PE2H3 | rna-NM_001178196.2_PE2H3 | cds-NP_009348.2_PE2H3 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999872.1:32336-34687:+ | gene-YAL053W_PE2H4 | rna-NM_001178196.2_PE2H4 | cds-NP_009348.2_PE2H4 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001133.9:45899-48250:+ | gene-YAL053W_S288C | rna-NM_001178196.2_S288C | cds-NP_009348.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000084.1:20506-22857:+ | gene-YAL053W_SA1 | rna-NM_001178196.2_SA1 | cds-NP_009348.2_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005487.1:46612-48963:+ | gene-YAL053W_ThermosaccDry | rna-NM_001178196.2_ThermosaccDry | cds-NP_009348.2_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005455.1:47365-49716:+ | gene-YAL053W_VR1 | rna-NM_001178196.2_VR1 | cds-NP_009348.2_VR1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000002.1:18419-20770:+ | gene-YAL053W_ZTW1 | rna-NM_001178196.2_ZTW1 | cds-NP_009348.2_ZTW1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047487.1:36134-38485:+ | gene-YAL053W_Sparadoxus | rna-NM_001178196.2_Sparadoxus | cds-NP_009348.2_Sparadoxus | 91.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |