FKS3 (YMR306W)


Gene profile

Gene name: FKS3
Reference locus (S288C): YMR306W
Gene biotype: protein_coding

Description: 1,3-beta-glucan synthase component FKS3; Protein involved in spore wall assembly; has similarity to 1,3-beta-D-glucan synthase catalytic subunits Fks1p and Gsc2p; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; Belongs to the glycosyltransferase 48 family

Top 10 interactors (score): FKS1 (0.999); GSC2 (0.983); YHL012W (0.934); UGP1 (0.913); RHO1 (0.89); SPR1 (0.771); EXG1 (0.737); BGL2 (0.703); GLG2 (0.659); GLG1 (0.659); TPS3 (0.65); TSL1 (0.65); GSY2 (0.65); TPS1 (0.65); GSY1 (0.65); EXG2 (0.65); TPS2 (0.65); MRPL11 (0.616); UTR2 (0.579); ADY3 (0.572)

Homologues (species, bitscore): CalS7 (Arabidopsis thaliana, 341.3)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005307.1:920721-926078:+ gene-YMR306W_AKU4011 rna-NM_001182817.1_AKU4011 cds-NP_014036.1_AKU4011 99.9 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000069.1:28133-33490:- gene-YMR306W_BG1 rna-NM_001182817.1_BG1 cds-NP_014036.1_BG1 99.8 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005515.1:866133-871490:+ gene-YMR306W_Bruggeman rna-NM_001182817.1_Bruggeman cds-NP_014036.1_Bruggeman 99.9 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005531.1:868695-874052:+ gene-YMR306W_CAT1 rna-NM_001182817.1_CAT1 cds-NP_014036.1_CAT1 99.9 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005371.1:852974-858331:+ gene-YMR306W_CBS1585 rna-NM_001182817.1_CBS1585 cds-NP_014036.1_CBS1585 99.9 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005355.1:875268-880625:+ gene-YMR306W_CBS436 rna-NM_001182817.1_CBS436 cds-NP_014036.1_CBS436 99.6 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005339.1:963694-969051:+ gene-YMR306W_CBS6412 rna-NM_001182817.1_CBS6412 cds-NP_014036.1_CBS6412 99.9 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005323.1:852094-857451:+ gene-YMR306W_CBS6413 rna-NM_001182817.1_CBS6413 cds-NP_014036.1_CBS6413 99.9 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001534.1:875722-881079:+ gene-YMR306W_CENPK1137D rna-NM_001182817.1_CENPK1137D cds-NP_014036.1_CENPK1137D 99.9 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005486.1:912723-918080:+ gene-YMR306W_EthanolRed rna-NM_001182817.1_EthanolRed cds-NP_014036.1_EthanolRed 99.9 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005547.1:858964-864321:+ gene-YMR306W_FaliES1 rna-NM_001182817.1_FaliES1 cds-NP_014036.1_FaliES1 99.9 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000096.1:30682-36039:- gene-YMR306W_JAY291 rna-NM_001182817.1_JAY291 cds-NP_014036.1_JAY291 99.9 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005419.1:859243-864600:+ gene-YMR306W_MUCL30387 rna-NM_001182817.1_MUCL30387 cds-NP_014036.1_MUCL30387 99.8 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005451.1:868736-874093:+ gene-YMR306W_MUCL30388 rna-NM_001182817.1_MUCL30388 cds-NP_014036.1_MUCL30388 99.9 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005291.1:854035-859392:+ gene-YMR306W_MUCL39482 rna-NM_001182817.1_MUCL39482 cds-NP_014036.1_MUCL39482 99.9 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005435.1:862346-867703:+ gene-YMR306W_MUCL42920 rna-NM_001182817.1_MUCL42920 cds-NP_014036.1_MUCL42920 99.8 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011822.1:881113-886470:+ gene-YMR306W_NCIM3186 rna-NM_001182817.1_NCIM3186 cds-NP_014036.1_NCIM3186 99.9 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005275.1:853694-859051:+ gene-YMR306W_NCYC1407 rna-NM_001182817.1_NCYC1407 cds-NP_014036.1_NCYC1407 99.9 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994152.1:868998-874355:+ gene-YMR306W_PE2H3 rna-NM_001182817.1_PE2H3 cds-NP_014036.1_PE2H3 99.9 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999884.1:864984-870341:+ gene-YMR306W_PE2H4 rna-NM_001182817.1_PE2H4 cds-NP_014036.1_PE2H4 99.8 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001145.3:881159-886516:+ gene-YMR306W_S288C rna-NM_001182817.1_S288C cds-NP_014036.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000036.1:58957-64314:+ gene-YMR306W_SA1 rna-NM_001182817.1_SA1 cds-NP_014036.1_SA1 99.9 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005499.1:855119-860476:+ gene-YMR306W_ThermosaccDry rna-NM_001182817.1_ThermosaccDry cds-NP_014036.1_ThermosaccDry 99.9 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005467.1:868850-874207:+ gene-YMR306W_VR1 rna-NM_001182817.1_VR1 cds-NP_014036.1_VR1 99.9 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000028.1:270340-275697:+ gene-YMR306W_ZTW1 rna-NM_001182817.1_ZTW1 cds-NP_014036.1_ZTW1 99.9 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047499.1:873764-879121:+ gene-YMR306W_Sparadoxus rna-NM_001182817.1_Sparadoxus cds-NP_014036.1_Sparadoxus 90.2 100.0 Verified 1 1 1 False True False False False

Additional files