Gene name: FKS1
Reference locus (S288C): YLR342W
Gene biotype: protein_coding
Description: 1,3-beta-glucan synthase component FKS1; Catalytic subunit of 1,3-beta-D-glucan synthase; functionally redundant with alternate catalytic subunit Gsc2p; binds to regulatory subunit Rho1p; involved in cell wall synthesis and maintenance; localizes to sites of cell wall remodeling; FKS1 has a paralog, GSC2, that arose from the whole genome duplication
Top 10 interactors (score): FKS3 (0.999); RHO1 (0.999); GSC2 (0.999); CHS3 (0.964); ROM2 (0.943); UGP1 (0.943); CNB1 (0.924); SLT2 (0.919); RLM1 (0.918); YHL012W (0.911); BGL2 (0.911); PKC1 (0.909); SMI1 (0.908); CRZ1 (0.901); MID2 (0.897); GAS1 (0.894); CNA1 (0.88); FAS1 (0.869); FAS2 (0.861); KRE6 (0.86)
Homologues (species, bitscore): GSL09 (Arabidopsis thaliana, 365.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:759521-765151:+ | gene-YLR342W_AKU4011 | rna-NM_001182231.1_AKU4011 | cds-NP_013446.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000080.1:26082-31712:+ | gene-YLR342W_BG1 | rna-NM_001182231.1_BG1 | cds-NP_013446.1_BG1 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:795869-801499:+ | gene-YLR342W_Bruggeman | rna-NM_001182231.1_Bruggeman | cds-NP_013446.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:792824-798454:+ | gene-YLR342W_CAT1 | rna-NM_001182231.1_CAT1 | cds-NP_013446.1_CAT1 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:794574-800204:+ | gene-YLR342W_CBS1585 | rna-NM_001182231.1_CBS1585 | cds-NP_013446.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:777880-783510:+ | gene-YLR342W_CBS436 | rna-NM_001182231.1_CBS436 | cds-NP_013446.1_CBS436 | 98.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:831571-837201:+ | gene-YLR342W_CBS6412 | rna-NM_001182231.1_CBS6412 | cds-NP_013446.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:795441-801071:+ | gene-YLR342W_CBS6413 | rna-NM_001182231.1_CBS6413 | cds-NP_013446.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:794613-800243:+ | gene-YLR342W_CENPK1137D | rna-NM_001182231.1_CENPK1137D | cds-NP_013446.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:751740-757370:+ | gene-YLR342W_EthanolRed | rna-NM_001182231.1_EthanolRed | cds-NP_013446.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:780941-786571:+ | gene-YLR342W_FaliES1 | rna-NM_001182231.1_FaliES1 | cds-NP_013446.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000315.1:2657-8287:- | gene-YLR342W_JAY291 | rna-NM_001182231.1_JAY291 | cds-NP_013446.1_JAY291 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:794323-799953:+ | gene-YLR342W_MUCL30387 | rna-NM_001182231.1_MUCL30387 | cds-NP_013446.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:799669-805299:+ | gene-YLR342W_MUCL30388 | rna-NM_001182231.1_MUCL30388 | cds-NP_013446.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:795793-801423:+ | gene-YLR342W_MUCL39482 | rna-NM_001182231.1_MUCL39482 | cds-NP_013446.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:791069-796699:+ | gene-YLR342W_MUCL42920 | rna-NM_001182231.1_MUCL42920 | cds-NP_013446.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:809971-815601:+ | gene-YLR342W_NCIM3186 | rna-NM_001182231.1_NCIM3186 | cds-NP_013446.1_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:805013-810643:+ | gene-YLR342W_NCYC1407 | rna-NM_001182231.1_NCYC1407 | cds-NP_013446.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:791643-797273:+ | gene-YLR342W_PE2H3 | rna-NM_001182231.1_PE2H3 | cds-NP_013446.1_PE2H3 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:791387-797017:+ | gene-YLR342W_PE2H4 | rna-NM_001182231.1_PE2H4 | cds-NP_013446.1_PE2H4 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:809997-815627:+ | gene-YLR342W_S288C | rna-NM_001182231.1_S288C | cds-NP_013446.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000007.1:233345-238975:- | gene-YLR342W_SA1 | rna-NM_001182231.1_SA1 | cds-NP_013446.1_SA1 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:782833-788463:+ | gene-YLR342W_ThermosaccDry | rna-NM_001182231.1_ThermosaccDry | cds-NP_013446.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:795885-801515:+ | gene-YLR342W_VR1 | rna-NM_001182231.1_VR1 | cds-NP_013446.1_VR1 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000025.1:121221-126851:+ | gene-YLR342W_ZTW1 | rna-NM_001182231.1_ZTW1 | cds-NP_013446.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:769306-774936:+ | gene-YLR342W_Sparadoxus | rna-NM_001182231.1_Sparadoxus | cds-NP_013446.1_Sparadoxus | 91.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |