Gene name: FIT1
Reference locus (S288C): YDR534C
Gene biotype: protein_coding
Description: Facilitator of iron transport 1; Mannoprotein that is incorporated into the cell wall; incorporated via a glycosylphosphatidylinositol (GPI) anchor; involved in the retention of siderophore-iron in the cell wall
Top 10 interactors (score): FIT2 (0.813); ARN1 (0.792); FET3 (0.748); AFT1 (0.748); ARN2 (0.723); FTR1 (0.718); ENB1 (0.715); FRE1 (0.712); HMX1 (0.673); FRE3 (0.653); FTH1 (0.599); HLR1 (0.583); GRX6 (0.571); YGR066C (0.57); FET5 (0.57); MAC1 (0.561); SIT1 (0.522); FRE2 (0.511); HXT15 (0.499); FMP48 (0.489)
Homologues (species, bitscore): Zan (Mus musculus, 66.6); OTOG (Danio rerio, 86.3); dp (Drosophila melanogaster, 69.7)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:1443330-1444493:- | gene-YDR534C_AKU4011 | rna-NM_001180842.1_AKU4011 | cds-NP_010823.1_AKU4011 | 72.9 | 73.3 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000073.1:84973-86253:- | gene-YDR534C_BG1 | rna-NM_001180842.1_BG1 | cds-NP_010823.1_BG1 | 69.1 | 74.4 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:1474619-1476523:- | gene-YDR534C_Bruggeman | rna-NM_001180842.1_Bruggeman | cds-NP_010823.1_Bruggeman | 78.8 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:1451812-1453716:- | gene-YDR534C_CAT1 | rna-NM_001180842.1_CAT1 | cds-NP_010823.1_CAT1 | 81.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:1438058-1439221:- | gene-YDR534C_CBS1585 | rna-NM_001180842.1_CBS1585 | cds-NP_010823.1_CBS1585 | 72.9 | 73.3 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:1457278-1458927:- | gene-YDR534C_CBS436 | rna-NM_001180842.1_CBS436 | cds-NP_010823.1_CBS436 | 92.4 | 99.7 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:1433222-1434385:- | gene-YDR534C_CBS6412 | rna-NM_001180842.1_CBS6412 | cds-NP_010823.1_CBS6412 | 72.9 | 73.3 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:1456718-1457881:- | gene-YDR534C_CBS6413 | rna-NM_001180842.1_CBS6413 | cds-NP_010823.1_CBS6413 | 72.9 | 73.3 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:1501989-1503155:- | gene-YDR534C_CENPK1137D | rna-NM_001180842.1_CENPK1137D | cds-NP_010823.1_CENPK1137D | 72.6 | 73.3 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:1446586-1448032:- | gene-YDR534C_EthanolRed | rna-NM_001180842.1_EthanolRed | cds-NP_010823.1_EthanolRed | 82.9 | 87.7 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:1450138-1451786:- | gene-YDR534C_FaliES1 | rna-NM_001180842.1_FaliES1 | cds-NP_010823.1_FaliES1 | 58.3 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000026.1:148498-149564:- | gene-YDR534C_JAY291 | rna-NM_001180842.1_JAY291 | cds-NP_010823.1_JAY291 | 59.9 | 64.1 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:1457830-1459443:- | gene-YDR534C_MUCL30387 | rna-NM_001180842.1_MUCL30387 | cds-NP_010823.1_MUCL30387 | 93.4 | 99.3 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:1439157-1440681:- | gene-YDR534C_MUCL30388 | rna-NM_001180842.1_MUCL30388 | cds-NP_010823.1_MUCL30388 | 79.3 | 87.5 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:1429555-1430718:- | gene-YDR534C_MUCL39482 | rna-NM_001180842.1_MUCL39482 | cds-NP_010823.1_MUCL39482 | 72.9 | 73.3 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:1372203-1373816:- | gene-YDR534C_MUCL42920 | rna-NM_001180842.1_MUCL42920 | cds-NP_010823.1_MUCL42920 | 93.4 | 99.3 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:1503237-1504823:- | gene-YDR534C_NCIM3186 | rna-NM_001180842.1_NCIM3186 | cds-NP_010823.1_NCIM3186 | 97.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:1442847-1444220:- | gene-YDR534C_NCYC1407 | rna-NM_001180842.1_NCYC1407 | cds-NP_010823.1_NCYC1407 | 85.8 | 86.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:1453767-1455206:- | gene-YDR534C_PE2H3 | rna-NM_001180842.1_PE2H3 | cds-NP_010823.1_PE2H3 | 82.3 | 87.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:1459235-1460674:- | gene-YDR534C_PE2H4 | rna-NM_001180842.1_PE2H4 | cds-NP_010823.1_PE2H4 | 82.3 | 87.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:1503314-1504900:- | gene-YDR534C_S288C | rna-NM_001180842.1_S288C | cds-NP_010823.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000004.1:112366-113802:+ | gene-YDR534C_SA1 | rna-NM_001180842.1_SA1 | cds-NP_010823.1_SA1 | 80.3 | 86.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:1454360-1456092:- | gene-YDR534C_ThermosaccDry | rna-NM_001180842.1_ThermosaccDry | cds-NP_010823.1_ThermosaccDry | 77.0 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:1470157-1471593:- | gene-YDR534C_VR1 | rna-NM_001180842.1_VR1 | cds-NP_010823.1_VR1 | 80.3 | 86.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000008.1:497019-498196:- | gene-YDR534C_ZTW1 | rna-NM_001180842.1_ZTW1 | cds-NP_010823.1_ZTW1 | 62.9 | 72.1 | Unannotated | 1 | 1 | 0 | False | False | True | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:1463078-1464607:- | gene-YDR534C_Sparadoxus | rna-NM_001180842.1_Sparadoxus | cds-NP_010823.1_Sparadoxus | 71.7 | 92.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |