FIG1 (YBR040W)


Gene profile

Gene name: FIG1
Reference locus (S288C): YBR040W
Gene biotype: protein_coding

Description: Factor-induced gene 1 protein; Integral membrane protein required for efficient mating; may participate in or regulate the low affinity Ca2+ influx system, which affects intracellular signaling and cell-cell fusion during mating

Top 10 interactors (score): PRM6 (0.933); FIG2 (0.895); FUS1 (0.808); FUS2 (0.778); KAR4 (0.75); AGA1 (0.707); PRM2 (0.702); MID1 (0.701); STE12 (0.697); PRM3 (0.69); CCH1 (0.672); FAR1 (0.62); FUS3 (0.618); MF(ALPHA)2 (0.613); STE2 (0.61); KSS1 (0.567); PCL2 (0.563); KAR5 (0.555); YKL070W (0.526); PRM1 (0.503)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005296.1:299396-300292:+ gene-YBR040W_AKU4011 rna-NM_001178388.1_AKU4011 cds-NP_009596.1_AKU4011 99.4 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000179.1:289561-290457:+ gene-YBR040W_BG1 rna-NM_001178388.1_BG1 cds-NP_009596.1_BG1 99.7 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005504.1:300131-301027:+ gene-YBR040W_Bruggeman rna-NM_001178388.1_Bruggeman cds-NP_009596.1_Bruggeman 100.0 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005520.1:303822-304718:+ gene-YBR040W_CAT1 rna-NM_001178388.1_CAT1 cds-NP_009596.1_CAT1 99.6 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005360.1:291693-292589:+ gene-YBR040W_CBS1585 rna-NM_001178388.1_CBS1585 cds-NP_009596.1_CBS1585 99.4 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005344.1:299702-300598:+ gene-YBR040W_CBS436 rna-NM_001178388.1_CBS436 cds-NP_009596.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005328.1:389576-390472:+ gene-YBR040W_CBS6412 rna-NM_001178388.1_CBS6412 cds-NP_009596.1_CBS6412 99.4 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005312.1:296810-297706:+ gene-YBR040W_CBS6413 rna-NM_001178388.1_CBS6413 cds-NP_009596.1_CBS6413 99.4 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001523.1:310728-311624:+ gene-YBR040W_CENPK1137D rna-NM_001178388.1_CENPK1137D cds-NP_009596.1_CENPK1137D 99.8 100.0 Verified 1 1 0 False False True False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005472.1:426173-427069:+ gene-YBR040W_EthanolRed rna-NM_001178388.1_EthanolRed cds-NP_009596.1_EthanolRed 99.2 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005536.1:315023-315919:+ gene-YBR040W_FaliES1 rna-NM_001178388.1_FaliES1 cds-NP_009596.1_FaliES1 99.2 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000441.1:15799-16695:- gene-YBR040W_JAY291 rna-NM_001178388.1_JAY291 cds-NP_009596.1_JAY291 99.7 100.0 Verified 1 1 0 False False True False False
MUCL30387 GCA_001738515.1 Bread Europe CM005408.1:301756-302652:+ gene-YBR040W_MUCL30387 rna-NM_001178388.1_MUCL30387 cds-NP_009596.1_MUCL30387 99.7 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005440.1:301541-302437:+ gene-YBR040W_MUCL30388 rna-NM_001178388.1_MUCL30388 cds-NP_009596.1_MUCL30388 99.8 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005280.1:291681-292577:+ gene-YBR040W_MUCL39482 rna-NM_001178388.1_MUCL39482 cds-NP_009596.1_MUCL39482 99.4 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005424.1:298882-299778:+ gene-YBR040W_MUCL42920 rna-NM_001178388.1_MUCL42920 cds-NP_009596.1_MUCL42920 100.0 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011811.1:316765-317661:+ gene-YBR040W_NCIM3186 rna-NM_001178388.1_NCIM3186 cds-NP_009596.1_NCIM3186 99.4 100.0 Verified 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005264.1:292593-293489:+ gene-YBR040W_NCYC1407 rna-NM_001178388.1_NCYC1407 cds-NP_009596.1_NCYC1407 99.4 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994141.1:304768-305664:+ gene-YBR040W_PE2H3 rna-NM_001178388.1_PE2H3 cds-NP_009596.1_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999873.1:302444-303340:+ gene-YBR040W_PE2H4 rna-NM_001178388.1_PE2H4 cds-NP_009596.1_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001134.8:316968-317864:+ gene-YBR040W_S288C rna-NM_001178388.1_S288C cds-NP_009596.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000017.1:159679-160575:- gene-YBR040W_SA1 rna-NM_001178388.1_SA1 cds-NP_009596.1_SA1 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005488.1:314464-315360:+ gene-YBR040W_ThermosaccDry rna-NM_001178388.1_ThermosaccDry cds-NP_009596.1_ThermosaccDry 99.2 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005456.1:296121-297017:+ gene-YBR040W_VR1 rna-NM_001178388.1_VR1 cds-NP_009596.1_VR1 100.0 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000003.1:290191-291087:+ gene-YBR040W_ZTW1 rna-NM_001178388.1_ZTW1 cds-NP_009596.1_ZTW1 99.5 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047488.1:326406-327302:+ gene-YBR040W_Sparadoxus rna-NM_001178388.1_Sparadoxus cds-NP_009596.1_Sparadoxus 88.8 100.0 Verified 1 1 1 False True False False False

Additional files