Gene name: FDH1
Reference locus (S288C): YOR388C
Gene biotype: protein_coding
Description: NAD(+)-dependent formate dehydrogenase; may protect cells from exogenous formate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. FDH subfamily
Top 10 interactors (score): YJL068C (0.99); FUM1 (0.926); MDH1 (0.916); MDH3 (0.912); BNA7 (0.9); DAL7 (0.886); MAE1 (0.884); MLS1 (0.864); PCK1 (0.849); MDH2 (0.847); PYC2 (0.838); PYC1 (0.808); SFA1 (0.782); PPS1 (0.777); SEI1 (0.747); CTA1 (0.734); ICL1 (0.727); AGX1 (0.712); ALT2 (0.687); FBA1 (0.66)
Homologues (species, bitscore): GRHPR (Homo sapiens, 105.9); Grhpr (Mus musculus, 110.2); grhpra (Danio rerio, 117.5); grhpr.2 (Xenopus tropicalis, 117.5); CG31674 (Drosophila melanogaster, 106.3); C31C9.2 (Caenorhabditis elegans, 99.0); FDH (Arabidopsis thaliana, 334.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:1992-3121:+ | gene-YOR388C_AKU4011 | rna-NM_001183808.1_AKU4011 | cds-NP_015033.1_AKU4011 | 99.5 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000197.1:9703-10834:- | gene-YOR388C_BG1 | rna-NM_001183808.1_BG1 | cds-NP_015033.1_BG1 | 99.7 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:14938-16316:+ | gene-YOR388C_Bruggeman | rna-NM_001183808.1_Bruggeman | cds-NP_015033.1_Bruggeman | 81.7 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:16714-17845:+ | gene-YOR388C_CAT1 | rna-NM_001183808.1_CAT1 | cds-NP_015033.1_CAT1 | 99.7 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:5742-6872:+ | gene-YOR388C_CBS1585 | rna-NM_001183808.1_CBS1585 | cds-NP_015033.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:13358-14489:+ | gene-YOR388C_CBS436 | rna-NM_001183808.1_CBS436 | cds-NP_015033.1_CBS436 | 99.7 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:11206-12335:+ | gene-YOR388C_CBS6412 | rna-NM_001183808.1_CBS6412 | cds-NP_015033.1_CBS6412 | 99.6 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:1047254-1048384:- | gene-YOR388C_CBS6413 | rna-NM_001183808.1_CBS6413 | cds-NP_015033.1_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:1071648-1072778:- | gene-YOR388C_CENPK1137D | rna-NM_001183808.1_CENPK1137D | cds-NP_015033.1_CENPK1137D | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:1038203-1039332:- | gene-YOR388C_EthanolRed | rna-NM_001183808.1_EthanolRed | cds-NP_015033.1_EthanolRed | 99.4 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:1040066-1041196:- | gene-YOR388C_FaliES1 | rna-NM_001183808.1_FaliES1 | cds-NP_015033.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000242.1:1198-2328:+ | gene-YOR388C_JAY291 | rna-NM_001183808.1_JAY291 | cds-NP_015033.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:18074-19454:+ | gene-YOR388C_MUCL30387 | rna-NM_001183808.1_MUCL30387 | cds-NP_015033.1_MUCL30387 | 81.6 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:16444-17226:+ | gene-YOR388C_MUCL30388 | rna-NM_001183808.1_MUCL30388 | cds-NP_015033.1_MUCL30388 | 68.9 | 69.2 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:1049669-1050799:- | gene-YOR388C_MUCL39482 | rna-NM_001183808.1_MUCL39482 | cds-NP_015033.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:9835-11176:+ | gene-YOR388C_MUCL42920 | rna-NM_001183808.1_MUCL42920 | cds-NP_015033.1_MUCL42920 | 79.1 | 96.6 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:1071682-1072812:- | gene-YOR388C_NCIM3186 | rna-NM_001183808.1_NCIM3186 | cds-NP_015033.1_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:1051027-1052157:- | gene-YOR388C_NCYC1407 | rna-NM_001183808.1_NCYC1407 | cds-NP_015033.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:912426-913556:- | gene-YOR388C_PE2H3 | rna-NM_001183808.1_PE2H3 | cds-NP_015033.1_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:908228-909358:- | gene-YOR388C_PE2H4 | rna-NM_001183808.1_PE2H4 | cds-NP_015033.1_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:1071793-1072923:- | gene-YOR388C_S288C | rna-NM_001183808.1_S288C | cds-NP_015033.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000123.1:8493-9623:+ | gene-YOR388C_SA1 | rna-NM_001183808.1_SA1 | cds-NP_015033.1_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:1039248-1040377:- | gene-YOR388C_ThermosaccDry | rna-NM_001183808.1_ThermosaccDry | cds-NP_015033.1_ThermosaccDry | 99.7 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:15735-16865:+ | gene-YOR388C_VR1 | rna-NM_001183808.1_VR1 | cds-NP_015033.1_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:7739-8869:+ | gene-YOR388C_ZTW1 | rna-NM_001183808.1_ZTW1 | cds-NP_015033.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:1046666-1047796:- | gene-YOR388C_Sparadoxus | rna-NM_001183808.1_Sparadoxus | cds-NP_015033.1_Sparadoxus | 91.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |