Gene name: FAT1
Reference locus (S288C): YBR041W
Gene biotype: protein_coding
Description: Very long chain fatty acyl-CoA synthetase and fatty acid transporter; activates imported fatty acids with a preference for very long lengths (C20-C26); has a separate function in the transport of long chain fatty acids
Top 10 interactors (score): FAA1 (0.977); POX1 (0.975); FAA4 (0.971); FOX2 (0.959); TES1 (0.951); SPS19 (0.946); TGL1 (0.945); CAT2 (0.922); CTT1 (0.91); FAA2 (0.91); DGA1 (0.906); PCD1 (0.903); STE23 (0.9); NCP1 (0.9); IDP2 (0.9); PXP1 (0.9); FMS1 (0.9); ERG7 (0.899); AYR1 (0.86); YEH1 (0.86)
Homologues (species, bitscore): SLC27A2 (Homo sapiens, 293.9); Slc27a6 (Mus musculus, 300.4); slc27a1b (Danio rerio, 309.3); slc27a3 (Xenopus tropicalis, 271.6); Fatp1 (Drosophila melanogaster, 281.2); acs-22 (Caenorhabditis elegans, 271.2); AAE3 (Arabidopsis thaliana, 84.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:300694-302703:+ | gene-YBR041W_AKU4011 | rna-NM_001178389.1_AKU4011 | cds-NP_009597.2_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:290860-292869:+ | gene-YBR041W_BG1 | rna-NM_001178389.1_BG1 | cds-NP_009597.2_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:301429-303438:+ | gene-YBR041W_Bruggeman | rna-NM_001178389.1_Bruggeman | cds-NP_009597.2_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:305120-307129:+ | gene-YBR041W_CAT1 | rna-NM_001178389.1_CAT1 | cds-NP_009597.2_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:292991-295000:+ | gene-YBR041W_CBS1585 | rna-NM_001178389.1_CBS1585 | cds-NP_009597.2_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:301000-303009:+ | gene-YBR041W_CBS436 | rna-NM_001178389.1_CBS436 | cds-NP_009597.2_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:390874-392883:+ | gene-YBR041W_CBS6412 | rna-NM_001178389.1_CBS6412 | cds-NP_009597.2_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:298108-300117:+ | gene-YBR041W_CBS6413 | rna-NM_001178389.1_CBS6413 | cds-NP_009597.2_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:312026-314035:+ | gene-YBR041W_CENPK1137D | rna-NM_001178389.1_CENPK1137D | cds-NP_009597.2_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:427471-429480:+ | gene-YBR041W_EthanolRed | rna-NM_001178389.1_EthanolRed | cds-NP_009597.2_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:316321-318330:+ | gene-YBR041W_FaliES1 | rna-NM_001178389.1_FaliES1 | cds-NP_009597.2_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000441.1:13388-15397:- | gene-YBR041W_JAY291 | rna-NM_001178389.1_JAY291 | cds-NP_009597.2_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:303054-305063:+ | gene-YBR041W_MUCL30387 | rna-NM_001178389.1_MUCL30387 | cds-NP_009597.2_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:302839-304848:+ | gene-YBR041W_MUCL30388 | rna-NM_001178389.1_MUCL30388 | cds-NP_009597.2_MUCL30388 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:292979-294988:+ | gene-YBR041W_MUCL39482 | rna-NM_001178389.1_MUCL39482 | cds-NP_009597.2_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:300180-302189:+ | gene-YBR041W_MUCL42920 | rna-NM_001178389.1_MUCL42920 | cds-NP_009597.2_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:318063-320072:+ | gene-YBR041W_NCIM3186 | rna-NM_001178389.1_NCIM3186 | cds-NP_009597.2_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:293891-295900:+ | gene-YBR041W_NCYC1407 | rna-NM_001178389.1_NCYC1407 | cds-NP_009597.2_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:306066-308075:+ | gene-YBR041W_PE2H3 | rna-NM_001178389.1_PE2H3 | cds-NP_009597.2_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:303742-305751:+ | gene-YBR041W_PE2H4 | rna-NM_001178389.1_PE2H4 | cds-NP_009597.2_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:318266-320275:+ | gene-YBR041W_S288C | rna-NM_001178389.1_S288C | cds-NP_009597.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000017.1:157268-159277:- | gene-YBR041W_SA1 | rna-NM_001178389.1_SA1 | cds-NP_009597.2_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:315762-317771:+ | gene-YBR041W_ThermosaccDry | rna-NM_001178389.1_ThermosaccDry | cds-NP_009597.2_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:297419-299428:+ | gene-YBR041W_VR1 | rna-NM_001178389.1_VR1 | cds-NP_009597.2_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:291489-293498:+ | gene-YBR041W_ZTW1 | rna-NM_001178389.1_ZTW1 | cds-NP_009597.2_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:327700-329709:+ | gene-YBR041W_Sparadoxus | rna-NM_001178389.1_Sparadoxus | cds-NP_009597.2_Sparadoxus | 92.1 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |