Gene name: FAR11
Reference locus (S288C): YNL127W
Gene biotype: protein_coding
Description: Factor arrest protein 11; Protein involved in recovery from cell cycle arrest; acts in response to pheromone; also involved in regulation of intra-S DNA damage checkpoint and autophagy; is essential for dephosphorylation of Atg13p; interacts with Far3p, Far7p, Far8p, Far9p, Far10p and with the phosphatases Pph21p, Pph22p and Pph3p; has similarity to the N- and C-termini of N. crassa HAM-2; similar to human Fam40A and Fam40B; Belongs to the FAR11 family
Top 10 interactors (score): FAR10 (0.999); VPS64 (0.999); FAR8 (0.999); TPD3 (0.997); FAR3 (0.99); PPH21 (0.976); FAR7 (0.958); PPG1 (0.917); PPH22 (0.899); KIC1 (0.882); SPS1 (0.882); ROM2 (0.833); PPH3 (0.801); YDR199W (0.748); DMA2 (0.719); DMA1 (0.719); SNT2 (0.677); HFM1 (0.676); TPI1 (0.663); SSE2 (0.659)
Homologues (species, bitscore): STRIP1 (Homo sapiens, 75.1); Strip1 (Mus musculus, 75.1); LOC556392 (Danio rerio, 81.3); STRIP2 (Xenopus tropicalis, 71.6); Strip (Drosophila melanogaster, 68.2); farl-11 (Caenorhabditis elegans, 60.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:377671-380532:+ | gene-YNL127W_AKU4011 | rna-NM_001182965.3_AKU4011 | cds-NP_014272.3_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:281665-284526:+ | gene-YNL127W_BG1 | rna-NM_001182965.3_BG1 | cds-NP_014272.3_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:387766-390627:+ | gene-YNL127W_Bruggeman | rna-NM_001182965.3_Bruggeman | cds-NP_014272.3_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:430967-433828:+ | gene-YNL127W_CAT1 | rna-NM_001182965.3_CAT1 | cds-NP_014272.3_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:378291-381152:+ | gene-YNL127W_CBS1585 | rna-NM_001182965.3_CBS1585 | cds-NP_014272.3_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:446682-449543:+ | gene-YNL127W_CBS436 | rna-NM_001182965.3_CBS436 | cds-NP_014272.3_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:373744-376605:+ | gene-YNL127W_CBS6412 | rna-NM_001182965.3_CBS6412 | cds-NP_014272.3_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:374709-377570:+ | gene-YNL127W_CBS6413 | rna-NM_001182965.3_CBS6413 | cds-NP_014272.3_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:377837-380698:+ | gene-YNL127W_CENPK1137D | rna-NM_001182965.3_CENPK1137D | cds-NP_014272.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:374661-377522:+ | gene-YNL127W_EthanolRed | rna-NM_001182965.3_EthanolRed | cds-NP_014272.3_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:370563-373424:+ | gene-YNL127W_FaliES1 | rna-NM_001182965.3_FaliES1 | cds-NP_014272.3_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000021.1:26941-29802:+ | gene-YNL127W_JAY291 | rna-NM_001182965.3_JAY291 | cds-NP_014272.3_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:383782-386643:+ | gene-YNL127W_MUCL30387 | rna-NM_001182965.3_MUCL30387 | cds-NP_014272.3_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:418895-421756:+ | gene-YNL127W_MUCL30388 | rna-NM_001182965.3_MUCL30388 | cds-NP_014272.3_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:375570-378431:+ | gene-YNL127W_MUCL39482 | rna-NM_001182965.3_MUCL39482 | cds-NP_014272.3_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:378560-381421:+ | gene-YNL127W_MUCL42920 | rna-NM_001182965.3_MUCL42920 | cds-NP_014272.3_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:383956-386817:+ | gene-YNL127W_NCIM3186 | rna-NM_001182965.3_NCIM3186 | cds-NP_014272.3_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:377702-380563:+ | gene-YNL127W_NCYC1407 | rna-NM_001182965.3_NCYC1407 | cds-NP_014272.3_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:376690-379551:+ | gene-YNL127W_PE2H3 | rna-NM_001182965.3_PE2H3 | cds-NP_014272.3_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:376078-378939:+ | gene-YNL127W_PE2H4 | rna-NM_001182965.3_PE2H4 | cds-NP_014272.3_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:383987-386848:+ | gene-YNL127W_S288C | rna-NM_001182965.3_S288C | cds-NP_014272.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000018.1:26666-29527:- | gene-YNL127W_SA1 | rna-NM_001182965.3_SA1 | cds-NP_014272.3_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:371417-374278:+ | gene-YNL127W_ThermosaccDry | rna-NM_001182965.3_ThermosaccDry | cds-NP_014272.3_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:390077-392938:+ | gene-YNL127W_VR1 | rna-NM_001182965.3_VR1 | cds-NP_014272.3_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:281251-284112:+ | gene-YNL127W_ZTW1 | rna-NM_001182965.3_ZTW1 | cds-NP_014272.3_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:382206-385067:+ | gene-YNL127W_Sparadoxus | rna-NM_001182965.3_Sparadoxus | cds-NP_014272.3_Sparadoxus | 89.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |