Gene name: FAP1
Reference locus (S288C): YNL023C
Gene biotype: protein_coding
Description: Transcriptional repressor nf-x1; Protein that binds to Fpr1p; confers rapamycin resistance by competing with rapamycin for Fpr1p binding; accumulates in the nucleus upon treatment of cells with rapamycin; has similarity to D. melanogaster shuttle craft and human NFX1
Top 10 interactors (score): FPR1 (0.821); GTF1 (0.765); HRT3 (0.756); YIL161W (0.723); TDA2 (0.714); RTC4 (0.711); RUP1 (0.644); GUK1 (0.626); THS1 (0.619); ASP1 (0.618); YRA1 (0.606); RPN5 (0.581); BDH1 (0.574); SRB7 (0.572); FCY1 (0.567); ASP3-2 (0.564); ASP3-3 (0.563); BET2 (0.561); MEX67 (0.547); MRE11 (0.537)
Homologues (species, bitscore): NFX1 (Homo sapiens, 330.1); Nfx1 (Mus musculus, 325.5); NFX1 (Danio rerio, 321.2); nfx1 (Xenopus tropicalis, 339.3); stc (Drosophila melanogaster, 291.2); nfx-1 (Caenorhabditis elegans, 318.5); NFXL1 (Arabidopsis thaliana, 290.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:570722-573619:- | gene-YNL023C_AKU4011 | rna-NM_001182862.1_AKU4011 | cds-NP_014375.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:466525-469422:+ | gene-YNL023C_BG1 | rna-NM_001182862.1_BG1 | cds-NP_014375.1_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:588142-591039:- | gene-YNL023C_Bruggeman | rna-NM_001182862.1_Bruggeman | cds-NP_014375.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:623591-626488:- | gene-YNL023C_CAT1 | rna-NM_001182862.1_CAT1 | cds-NP_014375.1_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:576406-579303:- | gene-YNL023C_CBS1585 | rna-NM_001182862.1_CBS1585 | cds-NP_014375.1_CBS1585 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:638816-641713:- | gene-YNL023C_CBS436 | rna-NM_001182862.1_CBS436 | cds-NP_014375.1_CBS436 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:566239-569136:- | gene-YNL023C_CBS6412 | rna-NM_001182862.1_CBS6412 | cds-NP_014375.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:567580-570477:- | gene-YNL023C_CBS6413 | rna-NM_001182862.1_CBS6413 | cds-NP_014375.1_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:581870-584767:- | gene-YNL023C_CENPK1137D | rna-NM_001182862.1_CENPK1137D | cds-NP_014375.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:572808-575705:- | gene-YNL023C_EthanolRed | rna-NM_001182862.1_EthanolRed | cds-NP_014375.1_EthanolRed | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:563832-566729:- | gene-YNL023C_FaliES1 | rna-NM_001182862.1_FaliES1 | cds-NP_014375.1_FaliES1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000387.1:7106-10003:+ | gene-YNL023C_JAY291 | rna-NM_001182862.1_JAY291 | cds-NP_014375.1_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:584024-586921:- | gene-YNL023C_MUCL30387 | rna-NM_001182862.1_MUCL30387 | cds-NP_014375.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:626818-629715:- | gene-YNL023C_MUCL30388 | rna-NM_001182862.1_MUCL30388 | cds-NP_014375.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:568001-570898:- | gene-YNL023C_MUCL39482 | rna-NM_001182862.1_MUCL39482 | cds-NP_014375.1_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:571559-574456:- | gene-YNL023C_MUCL42920 | rna-NM_001182862.1_MUCL42920 | cds-NP_014375.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:588232-591129:- | gene-YNL023C_NCIM3186 | rna-NM_001182862.1_NCIM3186 | cds-NP_014375.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:570206-573103:- | gene-YNL023C_NCYC1407 | rna-NM_001182862.1_NCYC1407 | cds-NP_014375.1_NCYC1407 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:572729-575626:- | gene-YNL023C_PE2H3 | rna-NM_001182862.1_PE2H3 | cds-NP_014375.1_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:574047-576944:- | gene-YNL023C_PE2H4 | rna-NM_001182862.1_PE2H4 | cds-NP_014375.1_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:588263-591160:- | gene-YNL023C_S288C | rna-NM_001182862.1_S288C | cds-NP_014375.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000109.1:14288-17185:- | gene-YNL023C_SA1 | rna-NM_001182862.1_SA1 | cds-NP_014375.1_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:564419-567316:- | gene-YNL023C_ThermosaccDry | rna-NM_001182862.1_ThermosaccDry | cds-NP_014375.1_ThermosaccDry | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:575435-578332:+ | gene-YNL023C_VR1 | rna-NM_001182862.1_VR1 | cds-NP_014375.1_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:466124-469021:+ | gene-YNL023C_ZTW1 | rna-NM_001182862.1_ZTW1 | cds-NP_014375.1_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:579517-582414:- | gene-YNL023C_Sparadoxus | rna-NM_001182862.1_Sparadoxus | cds-NP_014375.1_Sparadoxus | 89.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |