Gene name: FAF1
Reference locus (S288C): YIL019W
Gene biotype: protein_coding
Description: Protein faf1; Protein required for pre-rRNA processing; also required for 40S ribosomal subunit assembly
Top 10 interactors (score): SAS10 (0.999); KRR1 (0.999); UTP11 (0.998); ENP2 (0.998); LCP5 (0.998); NOP14 (0.997); RRP14 (0.997); IMP4 (0.996); BFR2 (0.996); RRP9 (0.995); EBP2 (0.995); BMS1 (0.995); IMP3 (0.995); UTP14 (0.995); FCF2 (0.993); UTP7 (0.992); PWP2 (0.991); FCF1 (0.99); HCA4 (0.99); NOP4 (0.989)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005303.1:313550-314590:+ | gene-YIL019W_AKU4011 | rna-NM_001179369.1_AKU4011 | cds-NP_012245.1_AKU4011 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000164.1:173377-174417:+ | gene-YIL019W_BG1 | rna-NM_001179369.1_BG1 | cds-NP_012245.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005511.1:318694-319734:+ | gene-YIL019W_Bruggeman | rna-NM_001179369.1_Bruggeman | cds-NP_012245.1_Bruggeman | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005527.1:306111-307151:+ | gene-YIL019W_CAT1 | rna-NM_001179369.1_CAT1 | cds-NP_012245.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005367.1:313641-314681:+ | gene-YIL019W_CBS1585 | rna-NM_001179369.1_CBS1585 | cds-NP_012245.1_CBS1585 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005351.1:307075-308115:+ | gene-YIL019W_CBS436 | rna-NM_001179369.1_CBS436 | cds-NP_012245.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005335.1:309173-310213:+ | gene-YIL019W_CBS6412 | rna-NM_001179369.1_CBS6412 | cds-NP_012245.1_CBS6412 | 99.0 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005319.1:305555-306595:+ | gene-YIL019W_CBS6413 | rna-NM_001179369.1_CBS6413 | cds-NP_012245.1_CBS6413 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001530.1:307002-308042:+ | gene-YIL019W_CENPK1137D | rna-NM_001179369.1_CENPK1137D | cds-NP_012245.1_CENPK1137D | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005479.1:296516-297556:+ | gene-YIL019W_EthanolRed | rna-NM_001179369.1_EthanolRed | cds-NP_012245.1_EthanolRed | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005543.1:314427-315467:+ | gene-YIL019W_FaliES1 | rna-NM_001179369.1_FaliES1 | cds-NP_012245.1_FaliES1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000098.1:1518-2558:- | gene-YIL019W_JAY291 | rna-NM_001179369.1_JAY291 | cds-NP_012245.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005415.1:315545-316585:+ | gene-YIL019W_MUCL30387 | rna-NM_001179369.1_MUCL30387 | cds-NP_012245.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005447.1:311650-312690:+ | gene-YIL019W_MUCL30388 | rna-NM_001179369.1_MUCL30388 | cds-NP_012245.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005287.1:314230-315270:+ | gene-YIL019W_MUCL39482 | rna-NM_001179369.1_MUCL39482 | cds-NP_012245.1_MUCL39482 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005431.1:317365-318405:+ | gene-YIL019W_MUCL42920 | rna-NM_001179369.1_MUCL42920 | cds-NP_012245.1_MUCL42920 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011818.1:315093-316133:+ | gene-YIL019W_NCIM3186 | rna-NM_001179369.1_NCIM3186 | cds-NP_012245.1_NCIM3186 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005271.1:318503-319543:+ | gene-YIL019W_NCYC1407 | rna-NM_001179369.1_NCYC1407 | cds-NP_012245.1_NCYC1407 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994148.1:310146-311186:+ | gene-YIL019W_PE2H3 | rna-NM_001179369.1_PE2H3 | cds-NP_012245.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999880.1:304852-305892:+ | gene-YIL019W_PE2H4 | rna-NM_001179369.1_PE2H4 | cds-NP_012245.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001141.2:315093-316133:+ | gene-YIL019W_S288C | rna-NM_001179369.1_S288C | cds-NP_012245.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000031.1:8398-9438:- | gene-YIL019W_SA1 | rna-NM_001179369.1_SA1 | cds-NP_012245.1_SA1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005495.1:313096-314136:+ | gene-YIL019W_ThermosaccDry | rna-NM_001179369.1_ThermosaccDry | cds-NP_012245.1_ThermosaccDry | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005463.1:309734-310774:+ | gene-YIL019W_VR1 | rna-NM_001179369.1_VR1 | cds-NP_012245.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000019.1:287516-288556:+ | gene-YIL019W_ZTW1 | rna-NM_001179369.1_ZTW1 | cds-NP_012245.1_ZTW1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047495.1:308230-309270:+ | gene-YIL019W_Sparadoxus | rna-NM_001179369.1_Sparadoxus | cds-NP_012245.1_Sparadoxus | 87.7 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |