Gene name: FAD1
Reference locus (S288C): YDL045C
Gene biotype: protein_coding
Description: Fmn adenylyltransferase; FAD synthase; Flavin adenine dinucleotide (FAD) synthetase; performs the second step in synthesis of FAD from riboflavin; mutation is functionally complemented by human FLAD1
Top 10 interactors (score): FMN1 (0.999); FLX1 (0.947); YMR178W (0.941); LTP1 (0.909); PHO5 (0.9); PHO3 (0.9); DIA3 (0.9); PHO11 (0.9); PHO12 (0.9); RIB5 (0.826); RIB7 (0.786); CIR2 (0.778); RIB2 (0.77); RIB4 (0.763); RIB1 (0.748); RIB3 (0.748); MCH5 (0.744); COQ6 (0.732); SDH1 (0.731); PML39 (0.716)
Homologues (species, bitscore): FLAD1 (Homo sapiens, 111.7); Flad1 (Mus musculus, 116.7); flad1 (Danio rerio, 121.3); flad1 (Xenopus tropicalis, 115.9); CG4407 (Drosophila melanogaster, 134.0); flad-1 (Caenorhabditis elegans, 100.1); AT5G03430 (Arabidopsis thaliana, 102.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:357307-358227:- | gene-YDL045C_AKU4011 | rna-NM_001180104.1_AKU4011 | cds-NP_010239.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000102.1:191477-192397:+ | gene-YDL045C_BG1 | rna-NM_001180104.1_BG1 | cds-NP_010239.1_BG1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:375787-376707:- | gene-YDL045C_Bruggeman | rna-NM_001180104.1_Bruggeman | cds-NP_010239.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:372009-372929:- | gene-YDL045C_CAT1 | rna-NM_001180104.1_CAT1 | cds-NP_010239.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:355557-356477:- | gene-YDL045C_CBS1585 | rna-NM_001180104.1_CBS1585 | cds-NP_010239.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:372229-373149:- | gene-YDL045C_CBS436 | rna-NM_001180104.1_CBS436 | cds-NP_010239.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:353264-354184:- | gene-YDL045C_CBS6412 | rna-NM_001180104.1_CBS6412 | cds-NP_010239.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:373596-374516:- | gene-YDL045C_CBS6413 | rna-NM_001180104.1_CBS6413 | cds-NP_010239.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:371548-372468:- | gene-YDL045C_CENPK1137D | rna-NM_001180104.1_CENPK1137D | cds-NP_010239.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:368090-369010:- | gene-YDL045C_EthanolRed | rna-NM_001180104.1_EthanolRed | cds-NP_010239.1_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:374318-375238:- | gene-YDL045C_FaliES1 | rna-NM_001180104.1_FaliES1 | cds-NP_010239.1_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000097.1:10546-11466:+ | gene-YDL045C_JAY291 | rna-NM_001180104.1_JAY291 | cds-NP_010239.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:372454-373374:- | gene-YDL045C_MUCL30387 | rna-NM_001180104.1_MUCL30387 | cds-NP_010239.1_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:363572-364492:- | gene-YDL045C_MUCL30388 | rna-NM_001180104.1_MUCL30388 | cds-NP_010239.1_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:356761-357681:- | gene-YDL045C_MUCL39482 | rna-NM_001180104.1_MUCL39482 | cds-NP_010239.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:278678-279598:- | gene-YDL045C_MUCL42920 | rna-NM_001180104.1_MUCL42920 | cds-NP_010239.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:372611-373531:- | gene-YDL045C_NCIM3186 | rna-NM_001180104.1_NCIM3186 | cds-NP_010239.1_NCIM3186 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:356642-357562:- | gene-YDL045C_NCYC1407 | rna-NM_001180104.1_NCYC1407 | cds-NP_010239.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:363821-364741:- | gene-YDL045C_PE2H3 | rna-NM_001180104.1_PE2H3 | cds-NP_010239.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:363823-364743:- | gene-YDL045C_PE2H4 | rna-NM_001180104.1_PE2H4 | cds-NP_010239.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:372688-373608:- | gene-YDL045C_S288C | rna-NM_001180104.1_S288C | cds-NP_010239.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000010.1:61319-62239:+ | gene-YDL045C_SA1 | rna-NM_001180104.1_SA1 | cds-NP_010239.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:373780-374700:- | gene-YDL045C_ThermosaccDry | rna-NM_001180104.1_ThermosaccDry | cds-NP_010239.1_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:376710-377630:- | gene-YDL045C_VR1 | rna-NM_001180104.1_VR1 | cds-NP_010239.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000006.1:371721-372641:- | gene-YDL045C_ZTW1 | rna-NM_001180104.1_ZTW1 | cds-NP_010239.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:374140-375060:- | gene-YDL045C_Sparadoxus | rna-NM_001180104.1_Sparadoxus | cds-NP_010239.1_Sparadoxus | 91.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |