Gene name: FAB1
Reference locus (S288C): YFR019W
Gene biotype: protein_coding
Description: 1-phosphatidylinositol 3-phosphate 5-kinase FAB1; 1-phosphatidylinositol-3-phosphate 5-kinase; vacuolar membrane kinase that generates phosphatidylinositol (3,5)P2, which is involved in vacuolar sorting and homeostasis
Top 10 interactors (score): VAC14 (0.999); FIG4 (0.999); ATG18 (0.997); VPS34 (0.997); VAC7 (0.997); STT4 (0.993); SAC1 (0.993); VPS15 (0.992); PEP7 (0.992); PIK1 (0.99); LSB6 (0.988); VPS30 (0.984); YMR1 (0.981); TEP1 (0.968); INP52 (0.962); TOR1 (0.961); INP53 (0.96); PLC1 (0.953); PIS1 (0.946); TCP1 (0.942)
Homologues (species, bitscore): PIKFYVE (Homo sapiens, 453.4); Pikfyve (Mus musculus, 454.9); pikfyve (Danio rerio, 462.6); ENSXETP00000059369 (Xenopus tropicalis, 224.9); fab1 (Drosophila melanogaster, 345.5); ppk-3 (Caenorhabditis elegans, 281.2); FAB1A (Arabidopsis thaliana, 419.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005300.1:174767-181579:+ | gene-YFR019W_AKU4011 | rna-NM_001179984.2_AKU4011 | cds-NP_116674.2_AKU4011 | 99.2 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000071.1:79106-85921:- | gene-YFR019W_BG1 | rna-NM_001179984.2_BG1 | cds-NP_116674.2_BG1 | 99.2 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005508.1:176597-183433:+ | gene-YFR019W_Bruggeman | rna-NM_001179984.2_Bruggeman | cds-NP_116674.2_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005524.1:180134-186955:+ | gene-YFR019W_CAT1 | rna-NM_001179984.2_CAT1 | cds-NP_116674.2_CAT1 | 99.1 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005364.1:176249-183070:+ | gene-YFR019W_CBS1585 | rna-NM_001179984.2_CBS1585 | cds-NP_116674.2_CBS1585 | 99.3 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005348.1:149464-156279:+ | gene-YFR019W_CBS436 | rna-NM_001179984.2_CBS436 | cds-NP_116674.2_CBS436 | 99.1 | 99.6 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005332.1:175333-182151:+ | gene-YFR019W_CBS6412 | rna-NM_001179984.2_CBS6412 | cds-NP_116674.2_CBS6412 | 99.3 | 99.7 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005316.1:177987-184805:+ | gene-YFR019W_CBS6413 | rna-NM_001179984.2_CBS6413 | cds-NP_116674.2_CBS6413 | 99.3 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001527.1:180598-187413:+ | gene-YFR019W_CENPK1137D | rna-NM_001179984.2_CENPK1137D | cds-NP_116674.2_CENPK1137D | 99.0 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005476.1:173869-180687:+ | gene-YFR019W_EthanolRed | rna-NM_001179984.2_EthanolRed | cds-NP_116674.2_EthanolRed | 99.3 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005540.1:175517-182335:+ | gene-YFR019W_FaliES1 | rna-NM_001179984.2_FaliES1 | cds-NP_116674.2_FaliES1 | 99.3 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000452.1:22258-29073:+ | gene-YFR019W_JAY291 | rna-NM_001179984.2_JAY291 | cds-NP_116674.2_JAY291 | 99.2 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005412.1:177840-184658:+ | gene-YFR019W_MUCL30387 | rna-NM_001179984.2_MUCL30387 | cds-NP_116674.2_MUCL30387 | 99.3 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005444.1:174079-180903:+ | gene-YFR019W_MUCL30388 | rna-NM_001179984.2_MUCL30388 | cds-NP_116674.2_MUCL30388 | 99.4 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005284.1:174177-180989:+ | gene-YFR019W_MUCL39482 | rna-NM_001179984.2_MUCL39482 | cds-NP_116674.2_MUCL39482 | 99.2 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005428.1:173476-180312:+ | gene-YFR019W_MUCL42920 | rna-NM_001179984.2_MUCL42920 | cds-NP_116674.2_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011815.1:184501-191337:+ | gene-YFR019W_NCIM3186 | rna-NM_001179984.2_NCIM3186 | cds-NP_116674.2_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005268.1:175052-181870:+ | gene-YFR019W_NCYC1407 | rna-NM_001179984.2_NCYC1407 | cds-NP_116674.2_NCYC1407 | 99.3 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994145.1:194278-201102:+ | gene-YFR019W_PE2H3 | rna-NM_001179984.2_PE2H3 | cds-NP_116674.2_PE2H3 | 99.3 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999877.1:193826-200650:+ | gene-YFR019W_PE2H4 | rna-NM_001179984.2_PE2H4 | cds-NP_116674.2_PE2H4 | 99.3 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001138.5:184502-191338:+ | gene-YFR019W_S288C | rna-NM_001179984.2_S288C | cds-NP_116674.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000011.1:133056-139877:- | gene-YFR019W_SA1 | rna-NM_001179984.2_SA1 | cds-NP_116674.2_SA1 | 99.0 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005492.1:174675-181493:+ | gene-YFR019W_ThermosaccDry | rna-NM_001179984.2_ThermosaccDry | cds-NP_116674.2_ThermosaccDry | 99.3 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005460.1:190195-197019:+ | gene-YFR019W_VR1 | rna-NM_001179984.2_VR1 | cds-NP_116674.2_VR1 | 99.2 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000013.1:105146-111964:+ | gene-YFR019W_ZTW1 | rna-NM_001179984.2_ZTW1 | cds-NP_116674.2_ZTW1 | 99.3 | 99.7 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047492.1:198591-205460:+ | gene-YFR019W_Sparadoxus | rna-NM_001179984.2_Sparadoxus | cds-NP_116674.2_Sparadoxus | 89.3 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |