Gene name: EXO5
Reference locus (S288C): YBR163W
Gene biotype: protein_coding
Description: Mitochondrial 5'-3' exonuclease and sliding exonuclease; required for mitochondrial genome maintenance; distantly related to the RecB nuclease domain of bacterial RecBCD recombinases; may be regulated by the transcription factor Ace2
Top 10 interactors (score): CMR1 (0.753); ESBP6 (0.747); URN1 (0.747); RPC17 (0.695); DUS1 (0.695); IRC8 (0.694); ORI5 (0.654); IKS1 (0.613); RPC37 (0.574); PSH1 (0.574); RPC82 (0.573); IMD4 (0.57); RPC40 (0.565); YTA7 (0.552); RPO31 (0.526); SWH1 (0.489); RFA3 (0.489); CKA2 (0.48); CHS6 (0.453); ABF2 (0.452)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:548596-550353:+ | gene-YBR163W_AKU4011 | rna-NM_001178511.3_AKU4011 | cds-NP_009722.3_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:539108-540865:+ | gene-YBR163W_BG1 | rna-NM_001178511.3_BG1 | cds-NP_009722.3_BG1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:551619-553376:+ | gene-YBR163W_Bruggeman | rna-NM_001178511.3_Bruggeman | cds-NP_009722.3_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:445735-447492:+ | gene-YBR163W_CAT1 | rna-NM_001178511.3_CAT1 | cds-NP_009722.3_CAT1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:540379-542136:+ | gene-YBR163W_CBS1585 | rna-NM_001178511.3_CBS1585 | cds-NP_009722.3_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:548461-550218:+ | gene-YBR163W_CBS436 | rna-NM_001178511.3_CBS436 | cds-NP_009722.3_CBS436 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:637862-639619:+ | gene-YBR163W_CBS6412 | rna-NM_001178511.3_CBS6412 | cds-NP_009722.3_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:545934-547691:+ | gene-YBR163W_CBS6413 | rna-NM_001178511.3_CBS6413 | cds-NP_009722.3_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:559523-561280:+ | gene-YBR163W_CENPK1137D | rna-NM_001178511.3_CENPK1137D | cds-NP_009722.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:674442-676199:+ | gene-YBR163W_EthanolRed | rna-NM_001178511.3_EthanolRed | cds-NP_009722.3_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:564674-566431:+ | gene-YBR163W_FaliES1 | rna-NM_001178511.3_FaliES1 | cds-NP_009722.3_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000310.1:4504-6261:+ | gene-YBR163W_JAY291 | rna-NM_001178511.3_JAY291 | cds-NP_009722.3_JAY291 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:553273-555030:+ | gene-YBR163W_MUCL30387 | rna-NM_001178511.3_MUCL30387 | cds-NP_009722.3_MUCL30387 | 99.7 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:552558-554315:+ | gene-YBR163W_MUCL30388 | rna-NM_001178511.3_MUCL30388 | cds-NP_009722.3_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:538751-540508:+ | gene-YBR163W_MUCL39482 | rna-NM_001178511.3_MUCL39482 | cds-NP_009722.3_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:548674-550431:+ | gene-YBR163W_MUCL42920 | rna-NM_001178511.3_MUCL42920 | cds-NP_009722.3_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:565520-567277:+ | gene-YBR163W_NCIM3186 | rna-NM_001178511.3_NCIM3186 | cds-NP_009722.3_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:541319-543076:+ | gene-YBR163W_NCYC1407 | rna-NM_001178511.3_NCYC1407 | cds-NP_009722.3_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:553978-555735:+ | gene-YBR163W_PE2H3 | rna-NM_001178511.3_PE2H3 | cds-NP_009722.3_PE2H3 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:551654-553411:+ | gene-YBR163W_PE2H4 | rna-NM_001178511.3_PE2H4 | cds-NP_009722.3_PE2H4 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:565723-567480:+ | gene-YBR163W_S288C | rna-NM_001178511.3_S288C | cds-NP_009722.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000032.1:86971-88728:+ | gene-YBR163W_SA1 | rna-NM_001178511.3_SA1 | cds-NP_009722.3_SA1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:563684-565441:+ | gene-YBR163W_ThermosaccDry | rna-NM_001178511.3_ThermosaccDry | cds-NP_009722.3_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:545131-546888:+ | gene-YBR163W_VR1 | rna-NM_001178511.3_VR1 | cds-NP_009722.3_VR1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:538800-540556:+ | gene-YBR163W_ZTW1 | rna-NM_001178511.3_ZTW1 | cds-NP_009722.3_ZTW1 | 99.8 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:576086-577843:+ | gene-YBR163W_Sparadoxus | rna-NM_001178511.3_Sparadoxus | cds-NP_009722.3_Sparadoxus | 86.9 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |