Gene name: ETP1
Reference locus (S288C): YHL010C
Gene biotype: protein_coding
Description: RING finger protein ETP1; Protein of unknown function required for growth on ethanol; contains a zinc finger region and has homology to human BRAP2, which is a cytoplasmic protein that binds nuclear localization sequences
Top 10 interactors (score): MAG2 (0.756); ASR1 (0.749); IRC20 (0.749); YBR062C (0.744); YKR073C (0.695); YMR075C-A (0.693); ITT1 (0.691); DUG2 (0.677); UBI4 (0.653); YCS4 (0.651); HUL4 (0.634); CYT1 (0.631); KAR3 (0.611); LSM12 (0.609); NHA1 (0.577); WWM1 (0.57); DMA2 (0.562); SAN1 (0.562); HEL2 (0.531); MTC5 (0.529)
Homologues (species, bitscore): BRAP (Homo sapiens, 247.3); Brap (Mus musculus, 246.5); brap (Danio rerio, 249.6); brap (Xenopus tropicalis, 254.2); CG5555 (Drosophila melanogaster, 245.4); EEED8.16 (Caenorhabditis elegans, 208.0); BRIZ2 (Arabidopsis thaliana, 243.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:76923-78680:- | gene-YHL010C_AKU4011 | rna-NM_001179090.1_AKU4011 | cds-NP_011853.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000122.1:67-1824:- | gene-YHL010C_BG1 | rna-NM_001179090.1_BG1 | cds-NP_011853.1_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:83784-85541:- | gene-YHL010C_Bruggeman | rna-NM_001179090.1_Bruggeman | cds-NP_011853.1_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:77757-79514:- | gene-YHL010C_CAT1 | rna-NM_001179090.1_CAT1 | cds-NP_011853.1_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:77510-79267:- | gene-YHL010C_CBS1585 | rna-NM_001179090.1_CBS1585 | cds-NP_011853.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:70008-71765:- | gene-YHL010C_CBS436 | rna-NM_001179090.1_CBS436 | cds-NP_011853.1_CBS436 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005334.1:77110-78867:- | gene-YHL010C_CBS6412 | rna-NM_001179090.1_CBS6412 | cds-NP_011853.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:76833-78590:- | gene-YHL010C_CBS6413 | rna-NM_001179090.1_CBS6413 | cds-NP_011853.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:75124-76881:- | gene-YHL010C_CENPK1137D | rna-NM_001179090.1_CENPK1137D | cds-NP_011853.1_CENPK1137D | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:76917-78674:- | gene-YHL010C_EthanolRed | rna-NM_001179090.1_EthanolRed | cds-NP_011853.1_EthanolRed | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:77446-79203:- | gene-YHL010C_FaliES1 | rna-NM_001179090.1_FaliES1 | cds-NP_011853.1_FaliES1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000299.1:119-1876:- | gene-YHL010C_JAY291 | rna-NM_001179090.1_JAY291 | cds-NP_011853.1_JAY291 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:80515-82272:- | gene-YHL010C_MUCL30387 | rna-NM_001179090.1_MUCL30387 | cds-NP_011853.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:81482-83239:- | gene-YHL010C_MUCL30388 | rna-NM_001179090.1_MUCL30388 | cds-NP_011853.1_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:76536-78293:- | gene-YHL010C_MUCL39482 | rna-NM_001179090.1_MUCL39482 | cds-NP_011853.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:80444-82201:- | gene-YHL010C_MUCL42920 | rna-NM_001179090.1_MUCL42920 | cds-NP_011853.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:81846-83603:- | gene-YHL010C_NCIM3186 | rna-NM_001179090.1_NCIM3186 | cds-NP_011853.1_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:75955-77712:- | gene-YHL010C_NCYC1407 | rna-NM_001179090.1_NCYC1407 | cds-NP_011853.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:72220-73977:- | gene-YHL010C_PE2H3 | rna-NM_001179090.1_PE2H3 | cds-NP_011853.1_PE2H3 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:79661-81418:- | gene-YHL010C_PE2H4 | rna-NM_001179090.1_PE2H4 | cds-NP_011853.1_PE2H4 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:81964-83721:- | gene-YHL010C_S288C | rna-NM_001179090.1_S288C | cds-NP_011853.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000075.1:56482-58239:+ | gene-YHL010C_SA1 | rna-NM_001179090.1_SA1 | cds-NP_011853.1_SA1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:78536-80293:- | gene-YHL010C_ThermosaccDry | rna-NM_001179090.1_ThermosaccDry | cds-NP_011853.1_ThermosaccDry | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:84077-85834:- | gene-YHL010C_VR1 | rna-NM_001179090.1_VR1 | cds-NP_011853.1_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:69713-71470:- | gene-YHL010C_ZTW1 | rna-NM_001179090.1_ZTW1 | cds-NP_011853.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:76064-77821:- | gene-YHL010C_Sparadoxus | rna-NM_001179090.1_Sparadoxus | cds-NP_011853.1_Sparadoxus | 89.1 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |