Gene name: ERV46
Reference locus (S288C): YAL042W
Gene biotype: protein_coding
Description: Endoplasmic reticulum-golgi intermediate compartment protein 3; Protein localized to COPII-coated vesicles; forms a complex with Erv41p; involved in the membrane fusion stage of transport; Belongs to the ERGIC family
Top 10 interactors (score): ERV41 (0.999); ERV25 (0.853); RER1 (0.85); SEC23 (0.831); SEC13 (0.824); ERV29 (0.824); MSS1 (0.81); SAR1 (0.807); EMP47 (0.788); SEC22 (0.779); SEC63 (0.771); KTR4 (0.767); ERO1 (0.757); ERV14 (0.748); OCH1 (0.745); SVP26 (0.745); EMP24 (0.732); COG3 (0.718); BET1 (0.718); YET3 (0.717)
Homologues (species, bitscore): ERGIC3 (Homo sapiens, 260.8); Ergic3 (Mus musculus, 261.9); ergic3 (Danio rerio, 257.3); ergic3 (Xenopus tropicalis, 263.1); CG7011 (Drosophila melanogaster, 183.3); erv-46 (Caenorhabditis elegans, 225.3); AT1G22200 (Arabidopsis thaliana, 232.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005295.1:46461-47708:+ | gene-YAL042W_AKU4011 | rna-NM_001178187.1_AKU4011 | cds-NP_009358.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000070.1:33528-34775:+ | gene-YAL042W_BG1 | rna-NM_001178187.1_BG1 | cds-NP_009358.1_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005503.1:60919-62166:+ | gene-YAL042W_Bruggeman | rna-NM_001178187.1_Bruggeman | cds-NP_009358.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005519.1:47678-48925:+ | gene-YAL042W_CAT1 | rna-NM_001178187.1_CAT1 | cds-NP_009358.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005359.1:59482-60729:+ | gene-YAL042W_CBS1585 | rna-NM_001178187.1_CBS1585 | cds-NP_009358.1_CBS1585 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005343.1:59724-60971:+ | gene-YAL042W_CBS436 | rna-NM_001178187.1_CBS436 | cds-NP_009358.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005327.1:45627-46874:+ | gene-YAL042W_CBS6412 | rna-NM_001178187.1_CBS6412 | cds-NP_009358.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005311.1:57745-58992:+ | gene-YAL042W_CBS6413 | rna-NM_001178187.1_CBS6413 | cds-NP_009358.1_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001522.1:61372-62619:+ | gene-YAL042W_CENPK1137D | rna-NM_001178187.1_CENPK1137D | cds-NP_009358.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005471.1:47875-49122:+ | gene-YAL042W_EthanolRed | rna-NM_001178187.1_EthanolRed | cds-NP_009358.1_EthanolRed | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005535.1:61817-63064:+ | gene-YAL042W_FaliES1 | rna-NM_001178187.1_FaliES1 | cds-NP_009358.1_FaliES1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000084.1:33767-35014:+ | gene-YAL042W_JAY291 | rna-NM_001178187.1_JAY291 | cds-NP_009358.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005407.1:62423-63670:+ | gene-YAL042W_MUCL30387 | rna-NM_001178187.1_MUCL30387 | cds-NP_009358.1_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005439.1:58970-60217:+ | gene-YAL042W_MUCL30388 | rna-NM_001178187.1_MUCL30388 | cds-NP_009358.1_MUCL30388 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005279.1:58286-59533:+ | gene-YAL042W_MUCL39482 | rna-NM_001178187.1_MUCL39482 | cds-NP_009358.1_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005423.1:60628-61875:+ | gene-YAL042W_MUCL42920 | rna-NM_001178187.1_MUCL42920 | cds-NP_009358.1_MUCL42920 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011810.1:61193-62440:+ | gene-YAL042W_NCIM3186 | rna-NM_001178187.1_NCIM3186 | cds-NP_009358.1_NCIM3186 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005263.1:46151-47398:+ | gene-YAL042W_NCYC1407 | rna-NM_001178187.1_NCYC1407 | cds-NP_009358.1_NCYC1407 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994140.1:48031-49278:+ | gene-YAL042W_PE2H3 | rna-NM_001178187.1_PE2H3 | cds-NP_009358.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999872.1:47750-48997:+ | gene-YAL042W_PE2H4 | rna-NM_001178187.1_PE2H4 | cds-NP_009358.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001133.9:61316-62563:+ | gene-YAL042W_S288C | rna-NM_001178187.1_S288C | cds-NP_009358.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000084.1:35925-37172:+ | gene-YAL042W_SA1 | rna-NM_001178187.1_SA1 | cds-NP_009358.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005487.1:62027-63274:+ | gene-YAL042W_ThermosaccDry | rna-NM_001178187.1_ThermosaccDry | cds-NP_009358.1_ThermosaccDry | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005455.1:63290-64537:+ | gene-YAL042W_VR1 | rna-NM_001178187.1_VR1 | cds-NP_009358.1_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000002.1:33836-35083:+ | gene-YAL042W_ZTW1 | rna-NM_001178187.1_ZTW1 | cds-NP_009358.1_ZTW1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047487.1:51514-52761:+ | gene-YAL042W_Sparadoxus | rna-NM_001178187.1_Sparadoxus | cds-NP_009358.1_Sparadoxus | 89.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |