Gene name: ERV29
Reference locus (S288C): YGR284C
Gene biotype: protein_coding
Description: Protein localized to COPII-coated vesicles; involved in vesicle formation and incorporation of specific secretory cargo; protein abundance increases in response to DNA replication stress; Belongs to the SURF4 family
Top 10 interactors (score): GOS1 (0.999); SEC61 (0.989); SEC23 (0.989); KAR2 (0.988); ERD2 (0.96); PDI1 (0.96); ERV25 (0.951); CNE1 (0.948); SSH1 (0.947); EUG1 (0.946); RER1 (0.931); LHS1 (0.924); ERP1 (0.919); SEC63 (0.915); ERV41 (0.911); SEC62 (0.901); OST1 (0.899); HUT1 (0.897); ERP2 (0.895); STE24 (0.886)
Homologues (species, bitscore): SURF4 (Homo sapiens, 147.9); Surf4 (Mus musculus, 146.7); surf4 (Danio rerio, 149.8); surf4.1 (Xenopus tropicalis, 147.5); Surf4 (Drosophila melanogaster, 158.7); sft-4 (Caenorhabditis elegans, 152.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:1026074-1027006:- | gene-YGR284C_AKU4011 | rna-NM_001181413.3_AKU4011 | cds-NP_011800.3_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000098.1:1111-2043:+ | gene-YGR284C_BG1 | rna-NM_001181413.3_BG1 | cds-NP_011800.3_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:1034638-1035570:- | gene-YGR284C_Bruggeman | rna-NM_001181413.3_Bruggeman | cds-NP_011800.3_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:1034112-1035044:- | gene-YGR284C_CAT1 | rna-NM_001181413.3_CAT1 | cds-NP_011800.3_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:1028942-1029874:- | gene-YGR284C_CBS1585 | rna-NM_001181413.3_CBS1585 | cds-NP_011800.3_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:1032611-1033543:- | gene-YGR284C_CBS436 | rna-NM_001181413.3_CBS436 | cds-NP_011800.3_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:1019834-1020766:- | gene-YGR284C_CBS6412 | rna-NM_001181413.3_CBS6412 | cds-NP_011800.3_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:1025887-1026819:- | gene-YGR284C_CBS6413 | rna-NM_001181413.3_CBS6413 | cds-NP_011800.3_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:1060382-1061314:- | gene-YGR284C_CENPK1137D | rna-NM_001181413.3_CENPK1137D | cds-NP_011800.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:1013913-1014845:- | gene-YGR284C_EthanolRed | rna-NM_001181413.3_EthanolRed | cds-NP_011800.3_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:1018719-1019651:- | gene-YGR284C_FaliES1 | rna-NM_001181413.3_FaliES1 | cds-NP_011800.3_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000076.1:10612-11544:+ | gene-YGR284C_JAY291 | rna-NM_001181413.3_JAY291 | cds-NP_011800.3_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:1032371-1033303:- | gene-YGR284C_MUCL30387 | rna-NM_001181413.3_MUCL30387 | cds-NP_011800.3_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:1030504-1031436:- | gene-YGR284C_MUCL30388 | rna-NM_001181413.3_MUCL30388 | cds-NP_011800.3_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:1024048-1024980:- | gene-YGR284C_MUCL39482 | rna-NM_001181413.3_MUCL39482 | cds-NP_011800.3_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:1041970-1042902:- | gene-YGR284C_MUCL42920 | rna-NM_001181413.3_MUCL42920 | cds-NP_011800.3_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:1060658-1061590:- | gene-YGR284C_NCIM3186 | rna-NM_001181413.3_NCIM3186 | cds-NP_011800.3_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:1019681-1020613:- | gene-YGR284C_NCYC1407 | rna-NM_001181413.3_NCYC1407 | cds-NP_011800.3_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:1044921-1045853:- | gene-YGR284C_PE2H3 | rna-NM_001181413.3_PE2H3 | cds-NP_011800.3_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:1049760-1050692:- | gene-YGR284C_PE2H4 | rna-NM_001181413.3_PE2H4 | cds-NP_011800.3_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:1060658-1061590:- | gene-YGR284C_S288C | rna-NM_001181413.3_S288C | cds-NP_011800.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000063.1:58951-59883:- | gene-YGR284C_SA1 | rna-NM_001181413.3_SA1 | cds-NP_011800.3_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:1039239-1040171:- | gene-YGR284C_ThermosaccDry | rna-NM_001181413.3_ThermosaccDry | cds-NP_011800.3_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:1145098-1146030:- | gene-YGR284C_VR1 | rna-NM_001181413.3_VR1 | cds-NP_011800.3_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000016.1:340650-341582:- | gene-YGR284C_ZTW1 | rna-NM_001181413.3_ZTW1 | cds-NP_011800.3_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:1031395-1032327:- | gene-YGR284C_Sparadoxus | rna-NM_001181413.3_Sparadoxus | cds-NP_011800.3_Sparadoxus | 93.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |