Gene name: ERT1
Reference locus (S288C): YBR239C
Gene biotype: protein_coding
Description: Transcriptional regulator; involved in regulation of gluconeogenesis and fermentable carbon utilization; GFP-fusion protein localizes to cytoplasm, nucleus; null mutation affects periodicity of transcriptional and metabolic oscillation; plays role in restricting Ty1 transposition; member of the zinc cluster family of proteins, similar to Rds2p
Top 10 interactors (score): PCK1 (0.84); SIP4 (0.748); CAT8 (0.713); YLR278C (0.712); YSC84 (0.53); RVS167 (0.53); MHF2 (0.526); ADR1 (0.489); RDS2 (0.437); MSN4 (0.431); INO4 (0.422); LSB3 (0.41)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:682662-684251:- | gene-YBR239C_AKU4011 | rna-NM_001178587.3_AKU4011 | cds-NP_009798.3_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000066.1:53625-55214:- | gene-YBR239C_BG1 | rna-NM_001178587.3_BG1 | cds-NP_009798.3_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:683815-685404:- | gene-YBR239C_Bruggeman | rna-NM_001178587.3_Bruggeman | cds-NP_009798.3_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:687270-688859:- | gene-YBR239C_CAT1 | rna-NM_001178587.3_CAT1 | cds-NP_009798.3_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:674194-675783:- | gene-YBR239C_CBS1585 | rna-NM_001178587.3_CBS1585 | cds-NP_009798.3_CBS1585 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:680617-682206:- | gene-YBR239C_CBS436 | rna-NM_001178587.3_CBS436 | cds-NP_009798.3_CBS436 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:769190-770779:- | gene-YBR239C_CBS6412 | rna-NM_001178587.3_CBS6412 | cds-NP_009798.3_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:680226-681815:- | gene-YBR239C_CBS6413 | rna-NM_001178587.3_CBS6413 | cds-NP_009798.3_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:692127-693716:- | gene-YBR239C_CENPK1137D | rna-NM_001178587.3_CENPK1137D | cds-NP_009798.3_CENPK1137D | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:805894-807483:- | gene-YBR239C_EthanolRed | rna-NM_001178587.3_EthanolRed | cds-NP_009798.3_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:699001-700590:- | gene-YBR239C_FaliES1 | rna-NM_001178587.3_FaliES1 | cds-NP_009798.3_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000067.1:101753-103342:+ | gene-YBR239C_JAY291 | rna-NM_001178587.3_JAY291 | cds-NP_009798.3_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:685831-687420:- | gene-YBR239C_MUCL30387 | rna-NM_001178587.3_MUCL30387 | cds-NP_009798.3_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:702910-704499:- | gene-YBR239C_MUCL30388 | rna-NM_001178587.3_MUCL30388 | cds-NP_009798.3_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:672546-674135:- | gene-YBR239C_MUCL39482 | rna-NM_001178587.3_MUCL39482 | cds-NP_009798.3_MUCL39482 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:682394-683983:- | gene-YBR239C_MUCL42920 | rna-NM_001178587.3_MUCL42920 | cds-NP_009798.3_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:698151-699740:- | gene-YBR239C_NCIM3186 | rna-NM_001178587.3_NCIM3186 | cds-NP_009798.3_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:674409-675998:- | gene-YBR239C_NCYC1407 | rna-NM_001178587.3_NCYC1407 | cds-NP_009798.3_NCYC1407 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:697523-699112:- | gene-YBR239C_PE2H3 | rna-NM_001178587.3_PE2H3 | cds-NP_009798.3_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:695199-696788:- | gene-YBR239C_PE2H4 | rna-NM_001178587.3_PE2H4 | cds-NP_009798.3_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:698354-699943:- | gene-YBR239C_S288C | rna-NM_001178587.3_S288C | cds-NP_009798.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000019.1:53480-55069:- | gene-YBR239C_SA1 | rna-NM_001178587.3_SA1 | cds-NP_009798.3_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:698011-699600:- | gene-YBR239C_ThermosaccDry | rna-NM_001178587.3_ThermosaccDry | cds-NP_009798.3_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:678196-679785:- | gene-YBR239C_VR1 | rna-NM_001178587.3_VR1 | cds-NP_009798.3_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:670883-672472:- | gene-YBR239C_ZTW1 | rna-NM_001178587.3_ZTW1 | cds-NP_009798.3_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:714868-716460:- | gene-YBR239C_Sparadoxus | rna-NM_001178587.3_Sparadoxus | cds-NP_009798.3_Sparadoxus | 90.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |