Gene name: ERP6
Reference locus (S288C): YGL002W
Gene biotype: protein_coding
Description: Protein ERP6; Member of the p24 family involved in ER to Golgi transport; similar to Emp24p and Erv25p; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; ERP6 has a paralog, ERP1, that arose from the whole genome duplication
Top 10 interactors (score): ERV25 (0.999); ERP1 (0.999); EMP24 (0.996); ERP4 (0.99); SEC26 (0.984); ERP3 (0.984); ERP2 (0.981); RRT6 (0.894); STT3 (0.837); SEC22 (0.682); SEC18 (0.671); ERV46 (0.667); SEC21 (0.655); SEC17 (0.653); SEC27 (0.646); SEC28 (0.645); RET2 (0.643); ERV41 (0.641); USO1 (0.635); BET1 (0.631)
Homologues (species, bitscore): TMED9 (Homo sapiens, 120.2); Tmed9 (Mus musculus, 122.5); tmed9 (Danio rerio, 120.2); tmed9 (Xenopus tropicalis, 119.0); eca (Drosophila melanogaster, 117.9); Y60A3A.9 (Caenorhabditis elegans, 116.7); AT1G69460 (Arabidopsis thaliana, 77.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:496568-497218:+ | gene-YGL002W_AKU4011 | rna-NM_001180867.1_AKU4011 | cds-NP_011513.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000060.1:78892-79542:- | gene-YGL002W_BG1 | rna-NM_001180867.1_BG1 | cds-NP_011513.1_BG1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:497537-498187:+ | gene-YGL002W_Bruggeman | rna-NM_001180867.1_Bruggeman | cds-NP_011513.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:496081-496731:+ | gene-YGL002W_CAT1 | rna-NM_001180867.1_CAT1 | cds-NP_011513.1_CAT1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:498062-498712:+ | gene-YGL002W_CBS1585 | rna-NM_001180867.1_CBS1585 | cds-NP_011513.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:492423-493073:+ | gene-YGL002W_CBS436 | rna-NM_001180867.1_CBS436 | cds-NP_011513.1_CBS436 | 99.0 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:490657-491307:+ | gene-YGL002W_CBS6412 | rna-NM_001180867.1_CBS6412 | cds-NP_011513.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:494733-495383:+ | gene-YGL002W_CBS6413 | rna-NM_001180867.1_CBS6413 | cds-NP_011513.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:494334-494984:+ | gene-YGL002W_CENPK1137D | rna-NM_001180867.1_CENPK1137D | cds-NP_011513.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:484939-485589:+ | gene-YGL002W_EthanolRed | rna-NM_001180867.1_EthanolRed | cds-NP_011513.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:488191-488841:+ | gene-YGL002W_FaliES1 | rna-NM_001180867.1_FaliES1 | cds-NP_011513.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000020.1:26822-27472:+ | gene-YGL002W_JAY291 | rna-NM_001180867.1_JAY291 | cds-NP_011513.1_JAY291 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:494759-495409:+ | gene-YGL002W_MUCL30387 | rna-NM_001180867.1_MUCL30387 | cds-NP_011513.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:497309-497959:+ | gene-YGL002W_MUCL30388 | rna-NM_001180867.1_MUCL30388 | cds-NP_011513.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:493880-494530:+ | gene-YGL002W_MUCL39482 | rna-NM_001180867.1_MUCL39482 | cds-NP_011513.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:503312-503962:+ | gene-YGL002W_MUCL42920 | rna-NM_001180867.1_MUCL42920 | cds-NP_011513.1_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:494517-495167:+ | gene-YGL002W_NCIM3186 | rna-NM_001180867.1_NCIM3186 | cds-NP_011513.1_NCIM3186 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:487921-488571:+ | gene-YGL002W_NCYC1407 | rna-NM_001180867.1_NCYC1407 | cds-NP_011513.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:490590-491240:+ | gene-YGL002W_PE2H3 | rna-NM_001180867.1_PE2H3 | cds-NP_011513.1_PE2H3 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:495640-496290:+ | gene-YGL002W_PE2H4 | rna-NM_001180867.1_PE2H4 | cds-NP_011513.1_PE2H4 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:494517-495167:+ | gene-YGL002W_S288C | rna-NM_001180867.1_S288C | cds-NP_011513.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000021.1:60415-61065:- | gene-YGL002W_SA1 | rna-NM_001180867.1_SA1 | cds-NP_011513.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:507516-508166:+ | gene-YGL002W_ThermosaccDry | rna-NM_001180867.1_ThermosaccDry | cds-NP_011513.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:597552-598202:+ | gene-YGL002W_VR1 | rna-NM_001180867.1_VR1 | cds-NP_011513.1_VR1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000014.1:486115-486765:+ | gene-YGL002W_ZTW1 | rna-NM_001180867.1_ZTW1 | cds-NP_011513.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:495718-496368:+ | gene-YGL002W_Sparadoxus | rna-NM_001180867.1_Sparadoxus | cds-NP_011513.1_Sparadoxus | 90.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |