ERP5 (YHR110W)


Gene profile

Gene name: ERP5
Reference locus (S288C): YHR110W
Gene biotype: protein_coding

Description: P24 family protein alpha; Protein with similarity to Emp24p and Erv25p; member of the p24 family involved in ER to Golgi transport

Top 10 interactors (score): ERV25 (0.998); EMP24 (0.98); ERP3 (0.954); ERP2 (0.945); SEC26 (0.89); ERP4 (0.766); SBH2 (0.76); EMC4 (0.75); NSG2 (0.748); YET3 (0.745); SPE3 (0.727); COY1 (0.716); SPE2 (0.711); SCS7 (0.7); SBH1 (0.7); PRM5 (0.695); STT3 (0.687); ERV29 (0.684); SEC22 (0.658); SEC18 (0.656)

Homologues (species, bitscore): TMED9 (Homo sapiens, 101.3); Tmed9 (Mus musculus, 100.9); tmed9 (Danio rerio, 99.0); tmed9 (Xenopus tropicalis, 99.0); eca (Drosophila melanogaster, 100.1); Y60A3A.9 (Caenorhabditis elegans, 95.5); AT1G26690 (Arabidopsis thaliana, 85.5)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005302.1:319202-319840:+ gene-YHR110W_AKU4011 rna-NM_001179240.1_AKU4011 cds-NP_011978.1_AKU4011 99.0 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000141.1:198069-198707:- gene-YHR110W_BG1 rna-NM_001179240.1_BG1 cds-NP_011978.1_BG1 100.0 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005510.1:326496-327134:+ gene-YHR110W_Bruggeman rna-NM_001179240.1_Bruggeman cds-NP_011978.1_Bruggeman 99.8 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005526.1:321637-322275:+ gene-YHR110W_CAT1 rna-NM_001179240.1_CAT1 cds-NP_011978.1_CAT1 99.6 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005366.1:318225-318863:+ gene-YHR110W_CBS1585 rna-NM_001179240.1_CBS1585 cds-NP_011978.1_CBS1585 99.2 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005350.1:315580-316218:+ gene-YHR110W_CBS436 rna-NM_001179240.1_CBS436 cds-NP_011978.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005334.1:320035-320673:+ gene-YHR110W_CBS6412 rna-NM_001179240.1_CBS6412 cds-NP_011978.1_CBS6412 99.2 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005318.1:319253-319891:+ gene-YHR110W_CBS6413 rna-NM_001179240.1_CBS6413 cds-NP_011978.1_CBS6413 99.0 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001529.1:325453-326091:+ gene-YHR110W_CENPK1137D rna-NM_001179240.1_CENPK1137D cds-NP_011978.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005478.1:378110-378748:+ gene-YHR110W_EthanolRed rna-NM_001179240.1_EthanolRed cds-NP_011978.1_EthanolRed 99.2 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005542.1:319598-320236:+ gene-YHR110W_FaliES1 rna-NM_001179240.1_FaliES1 cds-NP_011978.1_FaliES1 99.2 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000045.1:40177-40815:+ gene-YHR110W_JAY291 rna-NM_001179240.1_JAY291 cds-NP_011978.1_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005414.1:326220-326858:+ gene-YHR110W_MUCL30387 rna-NM_001179240.1_MUCL30387 cds-NP_011978.1_MUCL30387 99.0 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005446.1:325874-326512:+ gene-YHR110W_MUCL30388 rna-NM_001179240.1_MUCL30388 cds-NP_011978.1_MUCL30388 100.0 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005286.1:318566-319204:+ gene-YHR110W_MUCL39482 rna-NM_001179240.1_MUCL39482 cds-NP_011978.1_MUCL39482 99.2 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005430.1:324812-325450:+ gene-YHR110W_MUCL42920 rna-NM_001179240.1_MUCL42920 cds-NP_011978.1_MUCL42920 99.8 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011817.1:332164-332802:+ gene-YHR110W_NCIM3186 rna-NM_001179240.1_NCIM3186 cds-NP_011978.1_NCIM3186 98.5 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005270.1:320775-321413:+ gene-YHR110W_NCYC1407 rna-NM_001179240.1_NCYC1407 cds-NP_011978.1_NCYC1407 99.0 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994147.1:320213-320851:+ gene-YHR110W_PE2H3 rna-NM_001179240.1_PE2H3 cds-NP_011978.1_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999879.1:327640-328278:+ gene-YHR110W_PE2H4 rna-NM_001179240.1_PE2H4 cds-NP_011978.1_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001140.6:332282-332920:+ gene-YHR110W_S288C rna-NM_001179240.1_S288C cds-NP_011978.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000014.1:26056-26694:- gene-YHR110W_SA1 rna-NM_001179240.1_SA1 cds-NP_011978.1_SA1 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005494.1:320681-321319:+ gene-YHR110W_ThermosaccDry rna-NM_001179240.1_ThermosaccDry cds-NP_011978.1_ThermosaccDry 99.2 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005462.1:328301-328939:+ gene-YHR110W_VR1 rna-NM_001179240.1_VR1 cds-NP_011978.1_VR1 100.0 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000017.1:311717-312355:+ gene-YHR110W_ZTW1 rna-NM_001179240.1_ZTW1 cds-NP_011978.1_ZTW1 99.3 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047494.1:317372-318010:+ gene-YHR110W_Sparadoxus rna-NM_001179240.1_Sparadoxus cds-NP_011978.1_Sparadoxus 87.3 100.0 Verified 1 1 1 False True False False False

Additional files