Gene name: ERP4
Reference locus (S288C): YOR016C
Gene biotype: protein_coding
Description: Protein ERP4; Member of the p24 family involved in ER to Golgi transport; similar to Emp24p and Erv25p; ERP4 has a paralog, ERP2, that arose from the whole genome duplication; Belongs to the EMP24/GP25L family
Top 10 interactors (score): ERP2 (0.999); ERP6 (0.99); ERP1 (0.974); ERV25 (0.973); EMP24 (0.848); ERD2 (0.827); COP1 (0.822); YDL121C (0.813); HRD1 (0.772); ERP5 (0.766); SEC28 (0.707); FPR2 (0.699); ERV29 (0.695); ERV41 (0.678); SEC17 (0.651); SEC18 (0.65); SEC22 (0.648); RET3 (0.642); RET2 (0.629); ORM2 (0.628)
Homologues (species, bitscore): TMED5 (Homo sapiens, 75.1); Tmed5 (Mus musculus, 81.3); tmed7 (Danio rerio, 67.4); tmed5 (Xenopus tropicalis, 69.7); opm (Drosophila melanogaster, 56.6); sel-9 (Caenorhabditis elegans, 63.2); AT3G22845 (Arabidopsis thaliana, 57.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:344668-345291:- | gene-YOR016C_AKU4011 | rna-NM_001183435.1_AKU4011 | cds-NP_014659.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000152.1:160240-160863:- | gene-YOR016C_BG1 | rna-NM_001183435.1_BG1 | cds-NP_014659.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:347410-348033:- | gene-YOR016C_Bruggeman | rna-NM_001183435.1_Bruggeman | cds-NP_014659.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:345542-346165:- | gene-YOR016C_CAT1 | rna-NM_001183435.1_CAT1 | cds-NP_014659.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:339359-339982:- | gene-YOR016C_CBS1585 | rna-NM_001183435.1_CBS1585 | cds-NP_014659.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:343719-344342:- | gene-YOR016C_CBS436 | rna-NM_001183435.1_CBS436 | cds-NP_014659.1_CBS436 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:338712-339335:- | gene-YOR016C_CBS6412 | rna-NM_001183435.1_CBS6412 | cds-NP_014659.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:346087-346710:- | gene-YOR016C_CBS6413 | rna-NM_001183435.1_CBS6413 | cds-NP_014659.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:360340-360963:- | gene-YOR016C_CENPK1137D | rna-NM_001183435.1_CENPK1137D | cds-NP_014659.1_CENPK1137D | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:341368-341991:- | gene-YOR016C_EthanolRed | rna-NM_001183435.1_EthanolRed | cds-NP_014659.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:344717-345340:- | gene-YOR016C_FaliES1 | rna-NM_001183435.1_FaliES1 | cds-NP_014659.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000035.1:15357-15980:- | gene-YOR016C_JAY291 | rna-NM_001183435.1_JAY291 | cds-NP_014659.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:351801-352424:- | gene-YOR016C_MUCL30387 | rna-NM_001183435.1_MUCL30387 | cds-NP_014659.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:355233-355856:- | gene-YOR016C_MUCL30388 | rna-NM_001183435.1_MUCL30388 | cds-NP_014659.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:346842-347465:- | gene-YOR016C_MUCL39482 | rna-NM_001183435.1_MUCL39482 | cds-NP_014659.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:361651-362274:- | gene-YOR016C_MUCL42920 | rna-NM_001183435.1_MUCL42920 | cds-NP_014659.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:360350-360973:- | gene-YOR016C_NCIM3186 | rna-NM_001183435.1_NCIM3186 | cds-NP_014659.1_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:353543-354166:- | gene-YOR016C_NCYC1407 | rna-NM_001183435.1_NCYC1407 | cds-NP_014659.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:352376-352999:- | gene-YOR016C_PE2H3 | rna-NM_001183435.1_PE2H3 | cds-NP_014659.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:362755-363378:- | gene-YOR016C_PE2H4 | rna-NM_001183435.1_PE2H4 | cds-NP_014659.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:360461-361084:- | gene-YOR016C_S288C | rna-NM_001183435.1_S288C | cds-NP_014659.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000001.1:328226-328849:- | gene-YOR016C_SA1 | rna-NM_001183435.1_SA1 | cds-NP_014659.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:343256-343879:- | gene-YOR016C_ThermosaccDry | rna-NM_001183435.1_ThermosaccDry | cds-NP_014659.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:344148-344771:- | gene-YOR016C_VR1 | rna-NM_001183435.1_VR1 | cds-NP_014659.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:77886-78509:- | gene-YOR016C_ZTW1 | rna-NM_001183435.1_ZTW1 | cds-NP_014659.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:350194-350817:- | gene-YOR016C_Sparadoxus | rna-NM_001183435.1_Sparadoxus | cds-NP_014659.1_Sparadoxus | 93.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |