Gene name: ERP1
Reference locus (S288C): YAR002C-A
Gene biotype: protein_coding
Description: Protein ERP1; Member of the p24 family involved in ER to Golgi transport; role in misfolded protein quality control; forms heterotrimeric complex with Erp2p, Emp24p, and Erv25p; localized to COPII-coated vesicles; ERP1 has a paralog, ERP6, that arose from the whole genome duplication
Top 10 interactors (score): ERP6 (0.999); EMP24 (0.999); ERV25 (0.999); ERP2 (0.998); SEC26 (0.984); ERP4 (0.974); ERP3 (0.958); ERV29 (0.919); ERV14 (0.86); ERV41 (0.854); STT3 (0.837); ERD2 (0.825); RET3 (0.795); KAR2 (0.787); BET1 (0.759); RET2 (0.751); COP1 (0.741); WBP1 (0.735); FPR2 (0.73); SEC28 (0.708)
Homologues (species, bitscore): TMED9 (Homo sapiens, 117.9); Tmed9 (Mus musculus, 122.1); tmed9 (Danio rerio, 116.7); tmed9 (Xenopus tropicalis, 114.4); eca (Drosophila melanogaster, 113.6); Y60A3A.9 (Caenorhabditis elegans, 122.1); p24delta5 (Arabidopsis thaliana, 56.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005295.1:139494-140153:- | gene-YAR002C-A_AKU4011 | rna-NM_001180033.1_AKU4011 | cds-NP_009402.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000103.1:1954-2613:- | gene-YAR002C-A_BG1 | rna-NM_001180033.1_BG1 | cds-NP_009402.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005503.1:154280-154939:- | gene-YAR002C-A_Bruggeman | rna-NM_001180033.1_Bruggeman | cds-NP_009402.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005519.1:140883-141542:- | gene-YAR002C-A_CAT1 | rna-NM_001180033.1_CAT1 | cds-NP_009402.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005359.1:152192-152851:- | gene-YAR002C-A_CBS1585 | rna-NM_001180033.1_CBS1585 | cds-NP_009402.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005343.1:152505-153164:- | gene-YAR002C-A_CBS436 | rna-NM_001180033.1_CBS436 | cds-NP_009402.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:764936-765595:- | gene-YAR002C-A_CBS6412 | rna-NM_001180033.1_CBS6412 | cds-NP_009402.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005311.1:150460-151119:- | gene-YAR002C-A_CBS6413 | rna-NM_001180033.1_CBS6413 | cds-NP_009402.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001522.1:153971-154630:- | gene-YAR002C-A_CENPK1137D | rna-NM_001180033.1_CENPK1137D | cds-NP_009402.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005471.1:140050-140709:- | gene-YAR002C-A_EthanolRed | rna-NM_001180033.1_EthanolRed | cds-NP_009402.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005535.1:155711-156370:- | gene-YAR002C-A_FaliES1 | rna-NM_001180033.1_FaliES1 | cds-NP_009402.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000248.1:13081-13740:- | gene-YAR002C-A_JAY291 | rna-NM_001180033.1_JAY291 | cds-NP_009402.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005407.1:155194-155853:- | gene-YAR002C-A_MUCL30387 | rna-NM_001180033.1_MUCL30387 | cds-NP_009402.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005439.1:152699-153358:- | gene-YAR002C-A_MUCL30388 | rna-NM_001180033.1_MUCL30388 | cds-NP_009402.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005279.1:151448-152107:- | gene-YAR002C-A_MUCL39482 | rna-NM_001180033.1_MUCL39482 | cds-NP_009402.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005423.1:153598-154257:- | gene-YAR002C-A_MUCL42920 | rna-NM_001180033.1_MUCL42920 | cds-NP_009402.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011810.1:153942-154601:- | gene-YAR002C-A_NCIM3186 | rna-NM_001180033.1_NCIM3186 | cds-NP_009402.1_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005263.1:138858-139517:- | gene-YAR002C-A_NCYC1407 | rna-NM_001180033.1_NCYC1407 | cds-NP_009402.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994140.1:140780-141439:- | gene-YAR002C-A_PE2H3 | rna-NM_001180033.1_PE2H3 | cds-NP_009402.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999872.1:140499-141158:- | gene-YAR002C-A_PE2H4 | rna-NM_001180033.1_PE2H4 | cds-NP_009402.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001133.9:154065-154724:- | gene-YAR002C-A_S288C | rna-NM_001180033.1_S288C | cds-NP_009402.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000100.1:12797-13456:- | gene-YAR002C-A_SA1 | rna-NM_001180033.1_SA1 | cds-NP_009402.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005487.1:154716-155375:- | gene-YAR002C-A_ThermosaccDry | rna-NM_001180033.1_ThermosaccDry | cds-NP_009402.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005455.1:159270-159929:- | gene-YAR002C-A_VR1 | rna-NM_001180033.1_VR1 | cds-NP_009402.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000002.1:126539-127198:- | gene-YAR002C-A_ZTW1 | rna-NM_001180033.1_ZTW1 | cds-NP_009402.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047487.1:144102-144761:- | gene-YAR002C-A_Sparadoxus | rna-NM_001180033.1_Sparadoxus | cds-NP_009402.1_Sparadoxus | 92.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |