Gene name: ERG9
Reference locus (S288C): YHR190W
Gene biotype: protein_coding
Description: Squalene synthase; Farnesyl-diphosphate farnesyl transferase (squalene synthase); joins two farnesyl pyrophosphate moieties to form squalene in the sterol biosynthesis pathway
Top 10 interactors (score): ERG11 (0.999); ERG25 (0.999); ERG3 (0.999); IDI1 (0.999); ERG20 (0.999); ERG26 (0.999); ERG1 (0.999); ERG27 (0.999); ERG7 (0.998); BTS1 (0.997); ERG6 (0.996); MVD1 (0.993); ERG24 (0.992); ERG28 (0.99); ERG13 (0.986); ERG10 (0.978); COQ1 (0.969); HMG1 (0.966); ERG12 (0.965); ERG8 (0.958)
Homologues (species, bitscore): FDFT1 (Homo sapiens, 312.8); Fdft1 (Mus musculus, 312.4); FDFT1 (Danio rerio, 314.3); fdft1 (Xenopus tropicalis, 306.2); SQS1 (Arabidopsis thaliana, 280.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:471925-473259:+ | gene-YHR190W_AKU4011 | rna-NM_001179321.1_AKU4011 | cds-NP_012060.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000141.1:44490-45824:- | gene-YHR190W_BG1 | rna-NM_001179321.1_BG1 | cds-NP_012060.1_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:479167-480501:+ | gene-YHR190W_Bruggeman | rna-NM_001179321.1_Bruggeman | cds-NP_012060.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:475448-476782:+ | gene-YHR190W_CAT1 | rna-NM_001179321.1_CAT1 | cds-NP_012060.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:471377-472711:+ | gene-YHR190W_CBS1585 | rna-NM_001179321.1_CBS1585 | cds-NP_012060.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:469317-470651:+ | gene-YHR190W_CBS436 | rna-NM_001179321.1_CBS436 | cds-NP_012060.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005334.1:471476-472810:+ | gene-YHR190W_CBS6412 | rna-NM_001179321.1_CBS6412 | cds-NP_012060.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:472767-474101:+ | gene-YHR190W_CBS6413 | rna-NM_001179321.1_CBS6413 | cds-NP_012060.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:478033-479367:+ | gene-YHR190W_CENPK1137D | rna-NM_001179321.1_CENPK1137D | cds-NP_012060.1_CENPK1137D | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:530464-531798:+ | gene-YHR190W_EthanolRed | rna-NM_001179321.1_EthanolRed | cds-NP_012060.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:472908-474242:+ | gene-YHR190W_FaliES1 | rna-NM_001179321.1_FaliES1 | cds-NP_012060.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000147.1:18068-19402:+ | gene-YHR190W_JAY291 | rna-NM_001179321.1_JAY291 | cds-NP_012060.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:480493-481827:+ | gene-YHR190W_MUCL30387 | rna-NM_001179321.1_MUCL30387 | cds-NP_012060.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:479916-481250:+ | gene-YHR190W_MUCL30388 | rna-NM_001179321.1_MUCL30388 | cds-NP_012060.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:471288-472622:+ | gene-YHR190W_MUCL39482 | rna-NM_001179321.1_MUCL39482 | cds-NP_012060.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:479232-480566:+ | gene-YHR190W_MUCL42920 | rna-NM_001179321.1_MUCL42920 | cds-NP_012060.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:484727-486061:+ | gene-YHR190W_NCIM3186 | rna-NM_001179321.1_NCIM3186 | cds-NP_012060.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:473751-475085:+ | gene-YHR190W_NCYC1407 | rna-NM_001179321.1_NCYC1407 | cds-NP_012060.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:472907-474241:+ | gene-YHR190W_PE2H3 | rna-NM_001179321.1_PE2H3 | cds-NP_012060.1_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:480334-481668:+ | gene-YHR190W_PE2H4 | rna-NM_001179321.1_PE2H4 | cds-NP_012060.1_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:484845-486179:+ | gene-YHR190W_S288C | rna-NM_001179321.1_S288C | cds-NP_012060.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000079.1:32994-34328:+ | gene-YHR190W_SA1 | rna-NM_001179321.1_SA1 | cds-NP_012060.1_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:473991-475325:+ | gene-YHR190W_ThermosaccDry | rna-NM_001179321.1_ThermosaccDry | cds-NP_012060.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:483209-484543:+ | gene-YHR190W_VR1 | rna-NM_001179321.1_VR1 | cds-NP_012060.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:464226-465560:+ | gene-YHR190W_ZTW1 | rna-NM_001179321.1_ZTW1 | cds-NP_012060.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:470930-472264:+ | gene-YHR190W_Sparadoxus | rna-NM_001179321.1_Sparadoxus | cds-NP_012060.1_Sparadoxus | 91.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |