ERG4 (YGL012W)


Gene profile

Gene name: ERG4
Reference locus (S288C): YGL012W
Gene biotype: protein_coding

Description: C-24(28) sterol reductase; catalyzes the final step in ergosterol biosynthesis; mutants are viable, but lack ergosterol; Belongs to the ERG4/ERG24 family

Top 10 interactors (score): ERG5 (0.999); ERG6 (0.999); ERG11 (0.998); ERG1 (0.997); ERG25 (0.997); ERG26 (0.996); ERG2 (0.996); ERG27 (0.995); ERG28 (0.994); ERG7 (0.985); ERG3 (0.98); ERG24 (0.97); ERG9 (0.938); ERG10 (0.918); ERG12 (0.891); ERG13 (0.889); ERG20 (0.858); MVD1 (0.856); ERG8 (0.836); STE20 (0.823)

Homologues (species, bitscore): LBR (Homo sapiens, 208.8); Lbr (Mus musculus, 198.4); tm7sf2 (Danio rerio, 194.9); tm7sf2 (Xenopus tropicalis, 185.3); LBR (Drosophila melanogaster, 50.4); dhcr-7 (Caenorhabditis elegans, 80.1); FK (Arabidopsis thaliana, 135.6)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005301.1:474906-476327:+ gene-YGL012W_AKU4011 rna-NM_001180877.1_AKU4011 cds-NP_011503.1_AKU4011 99.9 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000060.1:99783-101204:- gene-YGL012W_BG1 rna-NM_001180877.1_BG1 cds-NP_011503.1_BG1 99.7 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005509.1:475875-477296:+ gene-YGL012W_Bruggeman rna-NM_001180877.1_Bruggeman cds-NP_011503.1_Bruggeman 99.9 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005525.1:474168-475589:+ gene-YGL012W_CAT1 rna-NM_001180877.1_CAT1 cds-NP_011503.1_CAT1 99.8 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005365.1:476377-477798:+ gene-YGL012W_CBS1585 rna-NM_001180877.1_CBS1585 cds-NP_011503.1_CBS1585 99.9 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005349.1:470757-472178:+ gene-YGL012W_CBS436 rna-NM_001180877.1_CBS436 cds-NP_011503.1_CBS436 99.7 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005333.1:468992-470413:+ gene-YGL012W_CBS6412 rna-NM_001180877.1_CBS6412 cds-NP_011503.1_CBS6412 99.8 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005317.1:473048-474469:+ gene-YGL012W_CBS6413 rna-NM_001180877.1_CBS6413 cds-NP_011503.1_CBS6413 99.9 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001528.1:472676-474097:+ gene-YGL012W_CENPK1137D rna-NM_001180877.1_CENPK1137D cds-NP_011503.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005477.1:463273-464694:+ gene-YGL012W_EthanolRed rna-NM_001180877.1_EthanolRed cds-NP_011503.1_EthanolRed 99.8 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005541.1:466529-467950:+ gene-YGL012W_FaliES1 rna-NM_001180877.1_FaliES1 cds-NP_011503.1_FaliES1 99.8 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000020.1:5164-6585:+ gene-YGL012W_JAY291 rna-NM_001180877.1_JAY291 cds-NP_011503.1_JAY291 99.7 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005413.1:473098-474519:+ gene-YGL012W_MUCL30387 rna-NM_001180877.1_MUCL30387 cds-NP_011503.1_MUCL30387 99.8 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005445.1:475647-477068:+ gene-YGL012W_MUCL30388 rna-NM_001180877.1_MUCL30388 cds-NP_011503.1_MUCL30388 99.9 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005285.1:472216-473637:+ gene-YGL012W_MUCL39482 rna-NM_001180877.1_MUCL39482 cds-NP_011503.1_MUCL39482 99.9 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005429.1:481653-483074:+ gene-YGL012W_MUCL42920 rna-NM_001180877.1_MUCL42920 cds-NP_011503.1_MUCL42920 99.7 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011816.1:472855-474276:+ gene-YGL012W_NCIM3186 rna-NM_001180877.1_NCIM3186 cds-NP_011503.1_NCIM3186 99.7 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005269.1:466238-467659:+ gene-YGL012W_NCYC1407 rna-NM_001180877.1_NCYC1407 cds-NP_011503.1_NCYC1407 99.9 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994146.1:468932-470353:+ gene-YGL012W_PE2H3 rna-NM_001180877.1_PE2H3 cds-NP_011503.1_PE2H3 99.7 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999878.1:473982-475403:+ gene-YGL012W_PE2H4 rna-NM_001180877.1_PE2H4 cds-NP_011503.1_PE2H4 99.7 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001139.9:472855-474276:+ gene-YGL012W_S288C rna-NM_001180877.1_S288C cds-NP_011503.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000021.1:81308-82729:- gene-YGL012W_SA1 rna-NM_001180877.1_SA1 cds-NP_011503.1_SA1 99.8 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005493.1:485854-487275:+ gene-YGL012W_ThermosaccDry rna-NM_001180877.1_ThermosaccDry cds-NP_011503.1_ThermosaccDry 99.8 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005461.1:575939-577360:+ gene-YGL012W_VR1 rna-NM_001180877.1_VR1 cds-NP_011503.1_VR1 99.7 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000014.1:464460-465881:+ gene-YGL012W_ZTW1 rna-NM_001180877.1_ZTW1 cds-NP_011503.1_ZTW1 99.9 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047493.1:474009-475430:+ gene-YGL012W_Sparadoxus rna-NM_001180877.1_Sparadoxus cds-NP_011503.1_Sparadoxus 90.3 100.0 Verified 1 1 1 False True False False False

Additional files