Gene name: ERG28
Reference locus (S288C): YER044C
Gene biotype: protein_coding
Description: Ergosterol biosynthetic protein 28; Endoplasmic reticulum membrane protein; may facilitate protein-protein interactions between the Erg26p dehydrogenase and the Erg27p 3-ketoreductase and/or tether these enzymes to the ER, also interacts with Erg6p
Top 10 interactors (score): ERG3 (0.999); ERG11 (0.999); ERG7 (0.999); ERG6 (0.999); ERG26 (0.999); ERG25 (0.999); ERG2 (0.999); ERG27 (0.999); ERG24 (0.999); ERG4 (0.994); ERG9 (0.99); ERG1 (0.951); ERG5 (0.923); ERG20 (0.849); ERG13 (0.82); YET1 (0.811); MVD1 (0.72); IDI1 (0.717); UPC2 (0.714); MCR1 (0.696)
Homologues (species, bitscore): C14orf1 (Homo sapiens, 75.5); Erg28 (Mus musculus, 77.0); C17H14orf1 (Danio rerio, 82.0); c14orf1 (Xenopus tropicalis, 77.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005299.1:231627-232073:- | gene-YER044C_AKU4011 | rna-NM_001178935.1_AKU4011 | cds-NP_010962.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000011.1:193639-194085:+ | gene-YER044C_BG1 | rna-NM_001178935.1_BG1 | cds-NP_010962.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005507.1:240484-240930:- | gene-YER044C_Bruggeman | rna-NM_001178935.1_Bruggeman | cds-NP_010962.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005523.1:234598-235044:- | gene-YER044C_CAT1 | rna-NM_001178935.1_CAT1 | cds-NP_010962.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005363.1:231536-231982:- | gene-YER044C_CBS1585 | rna-NM_001178935.1_CBS1585 | cds-NP_010962.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005347.1:233484-233930:- | gene-YER044C_CBS436 | rna-NM_001178935.1_CBS436 | cds-NP_010962.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005331.1:231397-231843:- | gene-YER044C_CBS6412 | rna-NM_001178935.1_CBS6412 | cds-NP_010962.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005315.1:237007-237453:- | gene-YER044C_CBS6413 | rna-NM_001178935.1_CBS6413 | cds-NP_010962.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001526.1:235763-236209:- | gene-YER044C_CENPK1137D | rna-NM_001178935.1_CENPK1137D | cds-NP_010962.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005475.1:232231-232677:- | gene-YER044C_EthanolRed | rna-NM_001178935.1_EthanolRed | cds-NP_010962.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005539.1:232494-232940:- | gene-YER044C_FaliES1 | rna-NM_001178935.1_FaliES1 | cds-NP_010962.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000192.1:30261-30707:- | gene-YER044C_JAY291 | rna-NM_001178935.1_JAY291 | cds-NP_010962.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005411.1:235935-236381:- | gene-YER044C_MUCL30387 | rna-NM_001178935.1_MUCL30387 | cds-NP_010962.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005443.1:232151-232597:- | gene-YER044C_MUCL30388 | rna-NM_001178935.1_MUCL30388 | cds-NP_010962.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005283.1:230578-231024:- | gene-YER044C_MUCL39482 | rna-NM_001178935.1_MUCL39482 | cds-NP_010962.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005427.1:237653-238099:- | gene-YER044C_MUCL42920 | rna-NM_001178935.1_MUCL42920 | cds-NP_010962.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011814.1:237569-238015:- | gene-YER044C_NCIM3186 | rna-NM_001178935.1_NCIM3186 | cds-NP_010962.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005267.1:235640-236086:- | gene-YER044C_NCYC1407 | rna-NM_001178935.1_NCYC1407 | cds-NP_010962.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994144.1:246273-246719:- | gene-YER044C_PE2H3 | rna-NM_001178935.1_PE2H3 | cds-NP_010962.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999876.1:236214-236660:- | gene-YER044C_PE2H4 | rna-NM_001178935.1_PE2H4 | cds-NP_010962.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001137.3:237570-238016:- | gene-YER044C_S288C | rna-NM_001178935.1_S288C | cds-NP_010962.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000020.1:5672-6118:+ | gene-YER044C_SA1 | rna-NM_001178935.1_SA1 | cds-NP_010962.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005491.1:233266-233712:- | gene-YER044C_ThermosaccDry | rna-NM_001178935.1_ThermosaccDry | cds-NP_010962.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005459.1:232369-232815:- | gene-YER044C_VR1 | rna-NM_001178935.1_VR1 | cds-NP_010962.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000009.1:230476-230922:- | gene-YER044C_ZTW1 | rna-NM_001178935.1_ZTW1 | cds-NP_010962.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047491.1:234310-234756:- | gene-YER044C_Sparadoxus | rna-NM_001178935.1_Sparadoxus | cds-NP_010962.1_Sparadoxus | 94.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |