ERG26 (YGL001C)


Gene profile

Gene name: ERG26
Reference locus (S288C): YGL001C
Gene biotype: protein_coding

Description: Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating; C-3 sterol dehydrogenase; catalyzes the second of three steps required to remove two C-4 methyl groups from an intermediate in ergosterol biosynthesis; human homolog NSDHL implicated in CK syndrome, and can complement yeast null mutant; molecular target of natural product and antifungal compound FR171456; Belongs to the 3-beta-HSD family

Top 10 interactors (score): ERG28 (0.999); ERG1 (0.999); ERG27 (0.999); ERG9 (0.999); ERG25 (0.999); ERG7 (0.999); ERG11 (0.999); ERG6 (0.999); ERG24 (0.998); ERG2 (0.996); ERG3 (0.996); ERG4 (0.996); IDI1 (0.992); ERG10 (0.975); ERG13 (0.974); ERG20 (0.951); ERG5 (0.937); HEM1 (0.926); ERG12 (0.906); HEM3 (0.901)

Homologues (species, bitscore): NSDHL (Homo sapiens, 221.9); Nsdhl (Mus musculus, 223.8); nsdhl (Danio rerio, 218.0); nsdhl (Xenopus tropicalis, 228.8); CG7724 (Drosophila melanogaster, 73.2); hsd-2 (Caenorhabditis elegans, 102.8); RTNLB24 (Arabidopsis thaliana, 189.5)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005301.1:497504-498553:- gene-YGL001C_AKU4011 rna-NM_001180866.1_AKU4011 cds-NP_011514.1_AKU4011 99.7 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000060.1:77557-78606:+ gene-YGL001C_BG1 rna-NM_001180866.1_BG1 cds-NP_011514.1_BG1 100.0 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005509.1:498473-499522:- gene-YGL001C_Bruggeman rna-NM_001180866.1_Bruggeman cds-NP_011514.1_Bruggeman 99.8 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005525.1:497017-498066:- gene-YGL001C_CAT1 rna-NM_001180866.1_CAT1 cds-NP_011514.1_CAT1 100.0 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005365.1:498998-500047:- gene-YGL001C_CBS1585 rna-NM_001180866.1_CBS1585 cds-NP_011514.1_CBS1585 99.7 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005349.1:493359-494408:- gene-YGL001C_CBS436 rna-NM_001180866.1_CBS436 cds-NP_011514.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005333.1:491593-492642:- gene-YGL001C_CBS6412 rna-NM_001180866.1_CBS6412 cds-NP_011514.1_CBS6412 99.7 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005317.1:495669-496718:- gene-YGL001C_CBS6413 rna-NM_001180866.1_CBS6413 cds-NP_011514.1_CBS6413 99.7 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001528.1:495270-496319:- gene-YGL001C_CENPK1137D rna-NM_001180866.1_CENPK1137D cds-NP_011514.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005477.1:485875-486924:- gene-YGL001C_EthanolRed rna-NM_001180866.1_EthanolRed cds-NP_011514.1_EthanolRed 99.6 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005541.1:489127-490176:- gene-YGL001C_FaliES1 rna-NM_001180866.1_FaliES1 cds-NP_011514.1_FaliES1 99.6 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000020.1:27758-28807:- gene-YGL001C_JAY291 rna-NM_001180866.1_JAY291 cds-NP_011514.1_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005413.1:495695-496744:- gene-YGL001C_MUCL30387 rna-NM_001180866.1_MUCL30387 cds-NP_011514.1_MUCL30387 99.8 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005445.1:498245-499294:- gene-YGL001C_MUCL30388 rna-NM_001180866.1_MUCL30388 cds-NP_011514.1_MUCL30388 99.7 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005285.1:494816-495865:- gene-YGL001C_MUCL39482 rna-NM_001180866.1_MUCL39482 cds-NP_011514.1_MUCL39482 99.6 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005429.1:504248-505297:- gene-YGL001C_MUCL42920 rna-NM_001180866.1_MUCL42920 cds-NP_011514.1_MUCL42920 100.0 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011816.1:495453-496502:- gene-YGL001C_NCIM3186 rna-NM_001180866.1_NCIM3186 cds-NP_011514.1_NCIM3186 94.4 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005269.1:488857-489906:- gene-YGL001C_NCYC1407 rna-NM_001180866.1_NCYC1407 cds-NP_011514.1_NCYC1407 99.7 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994146.1:491526-492575:- gene-YGL001C_PE2H3 rna-NM_001180866.1_PE2H3 cds-NP_011514.1_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999878.1:496576-497625:- gene-YGL001C_PE2H4 rna-NM_001180866.1_PE2H4 cds-NP_011514.1_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001139.9:495453-496502:- gene-YGL001C_S288C rna-NM_001180866.1_S288C cds-NP_011514.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000021.1:59080-60129:+ gene-YGL001C_SA1 rna-NM_001180866.1_SA1 cds-NP_011514.1_SA1 99.7 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005493.1:508452-509501:- gene-YGL001C_ThermosaccDry rna-NM_001180866.1_ThermosaccDry cds-NP_011514.1_ThermosaccDry 99.6 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005461.1:598488-599537:- gene-YGL001C_VR1 rna-NM_001180866.1_VR1 cds-NP_011514.1_VR1 99.9 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000014.1:487051-488100:- gene-YGL001C_ZTW1 rna-NM_001180866.1_ZTW1 cds-NP_011514.1_ZTW1 99.9 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047493.1:496668-497717:- gene-YGL001C_Sparadoxus rna-NM_001180866.1_Sparadoxus cds-NP_011514.1_Sparadoxus 92.0 100.0 Verified 1 1 1 False True False False False

Additional files