ERG25 (YGR060W)


Gene profile

Gene name: ERG25
Reference locus (S288C): YGR060W
Gene biotype: protein_coding

Description: Methylsterol monooxygenase; C-4 methyl sterol oxidase; catalyzes the first of three steps required to remove two C-4 methyl groups from an intermediate in ergosterol biosynthesis; mutants accumulate the sterol intermediate 4,4-dimethylzymosterol; human MSMO1 functionally complements the growth defect caused by repression of ERG25 expression

Top 10 interactors (score): ERG27 (0.999); ERG1 (0.999); ERG2 (0.999); ERG11 (0.999); ERG5 (0.999); ERG7 (0.999); ERG9 (0.999); ERG3 (0.999); ERG28 (0.999); ERG26 (0.999); ERG6 (0.998); ERG4 (0.997); ERG24 (0.997); ERG13 (0.994); HMG1 (0.979); IDI1 (0.969); MVD1 (0.959); HMG2 (0.953); ERG20 (0.953); HEM2 (0.932)

Homologues (species, bitscore): MSMO1 (Homo sapiens, 190.7); Msmo1 (Mus musculus, 188.0); msmo1 (Danio rerio, 177.6); msmo1 (Xenopus tropicalis, 175.3); CG11162 (Drosophila melanogaster, 89.7); F49E12.9 (Caenorhabditis elegans, 86.3); SMO2-1 (Arabidopsis thaliana, 181.8)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005301.1:594264-595193:+ gene-YGR060W_AKU4011 rna-NM_001181189.3_AKU4011 cds-NP_011574.3_AKU4011 99.5 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000173.1:30659-31588:+ gene-YGR060W_BG1 rna-NM_001181189.3_BG1 cds-NP_011574.3_BG1 100.0 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005509.1:596544-597473:+ gene-YGR060W_Bruggeman rna-NM_001181189.3_Bruggeman cds-NP_011574.3_Bruggeman 99.6 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005525.1:594970-595899:+ gene-YGR060W_CAT1 rna-NM_001181189.3_CAT1 cds-NP_011574.3_CAT1 100.0 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005365.1:595578-596507:+ gene-YGR060W_CBS1585 rna-NM_001181189.3_CBS1585 cds-NP_011574.3_CBS1585 99.5 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005349.1:596866-597795:+ gene-YGR060W_CBS436 rna-NM_001181189.3_CBS436 cds-NP_011574.3_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005333.1:588373-589302:+ gene-YGR060W_CBS6412 rna-NM_001181189.3_CBS6412 cds-NP_011574.3_CBS6412 99.4 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005317.1:592369-593298:+ gene-YGR060W_CBS6413 rna-NM_001181189.3_CBS6413 cds-NP_011574.3_CBS6413 99.7 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001528.1:610301-611230:+ gene-YGR060W_CENPK1137D rna-NM_001181189.3_CENPK1137D cds-NP_011574.3_CENPK1137D 99.8 100.0 Verified 1 1 1 False True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005477.1:582503-583432:+ gene-YGR060W_EthanolRed rna-NM_001181189.3_EthanolRed cds-NP_011574.3_EthanolRed 99.5 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005541.1:585987-586916:+ gene-YGR060W_FaliES1 rna-NM_001181189.3_FaliES1 cds-NP_011574.3_FaliES1 99.6 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000435.1:36925-37854:+ gene-YGR060W_JAY291 rna-NM_001181189.3_JAY291 cds-NP_011574.3_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005413.1:593177-594106:+ gene-YGR060W_MUCL30387 rna-NM_001181189.3_MUCL30387 cds-NP_011574.3_MUCL30387 99.8 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005445.1:596574-597503:+ gene-YGR060W_MUCL30388 rna-NM_001181189.3_MUCL30388 cds-NP_011574.3_MUCL30388 99.7 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005285.1:591395-592324:+ gene-YGR060W_MUCL39482 rna-NM_001181189.3_MUCL39482 cds-NP_011574.3_MUCL39482 99.5 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005429.1:601202-602131:+ gene-YGR060W_MUCL42920 rna-NM_001181189.3_MUCL42920 cds-NP_011574.3_MUCL42920 99.8 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011816.1:610564-611493:+ gene-YGR060W_NCIM3186 rna-NM_001181189.3_NCIM3186 cds-NP_011574.3_NCIM3186 99.5 100.0 Verified 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005269.1:585593-586522:+ gene-YGR060W_NCYC1407 rna-NM_001181189.3_NCYC1407 cds-NP_011574.3_NCYC1407 99.6 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994146.1:588830-589759:+ gene-YGR060W_PE2H3 rna-NM_001181189.3_PE2H3 cds-NP_011574.3_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999878.1:593937-594866:+ gene-YGR060W_PE2H4 rna-NM_001181189.3_PE2H4 cds-NP_011574.3_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001139.9:610564-611493:+ gene-YGR060W_S288C rna-NM_001181189.3_S288C cds-NP_011574.3_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000015.1:37029-37958:+ gene-YGR060W_SA1 rna-NM_001181189.3_SA1 cds-NP_011574.3_SA1 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005493.1:605325-606254:+ gene-YGR060W_ThermosaccDry rna-NM_001181189.3_ThermosaccDry cds-NP_011574.3_ThermosaccDry 99.5 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005461.1:702251-703180:+ gene-YGR060W_VR1 rna-NM_001181189.3_VR1 cds-NP_011574.3_VR1 99.8 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000015.1:60795-61724:+ gene-YGR060W_ZTW1 rna-NM_001181189.3_ZTW1 cds-NP_011574.3_ZTW1 99.6 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047493.1:595797-596726:+ gene-YGR060W_Sparadoxus rna-NM_001181189.3_Sparadoxus cds-NP_011574.3_Sparadoxus 96.2 100.0 Verified 1 1 1 False True False False False

Additional files