ERG24 (YNL280C)


Gene profile

Gene name: ERG24
Reference locus (S288C): YNL280C
Gene biotype: protein_coding

Description: C-14 sterol reductase; acts in ergosterol biosynthesis; mutants accumulate the abnormal sterol ignosterol (ergosta-8,14 dienol), and are viable under anaerobic growth conditions but inviable on rich medium under aerobic conditions; Belongs to the ERG4/ERG24 family

Top 10 interactors (score): ERG11 (0.999); ERG28 (0.999); ERG6 (0.999); ERG3 (0.999); ERG2 (0.999); ERG1 (0.998); ERG26 (0.998); ERG27 (0.997); ERG25 (0.997); ERG9 (0.992); ERG7 (0.987); ERG5 (0.974); ERG4 (0.97); ERG13 (0.923); ERG20 (0.921); ERG10 (0.919); ERG8 (0.894); KAP95 (0.888); ERG12 (0.858); MVD1 (0.83)

Homologues (species, bitscore): LBR (Homo sapiens, 292.4); Lbr (Mus musculus, 312.0); tm7sf2 (Danio rerio, 305.8); tm7sf2 (Xenopus tropicalis, 292.4); LBR (Drosophila melanogaster, 85.9); dhcr-7 (Caenorhabditis elegans, 103.2); FK (Arabidopsis thaliana, 211.8)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005308.1:102902-104218:- gene-YNL280C_AKU4011 rna-NM_001183118.1_AKU4011 cds-NP_014119.1_AKU4011 99.7 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000155.1:6774-8090:- gene-YNL280C_BG1 rna-NM_001183118.1_BG1 cds-NP_014119.1_BG1 100.0 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005516.1:112690-114006:- gene-YNL280C_Bruggeman rna-NM_001183118.1_Bruggeman cds-NP_014119.1_Bruggeman 99.8 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005532.1:115947-117263:- gene-YNL280C_CAT1 rna-NM_001183118.1_CAT1 cds-NP_014119.1_CAT1 100.0 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005372.1:103292-104608:- gene-YNL280C_CBS1585 rna-NM_001183118.1_CBS1585 cds-NP_014119.1_CBS1585 99.5 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005356.1:98371-99687:- gene-YNL280C_CBS436 rna-NM_001183118.1_CBS436 cds-NP_014119.1_CBS436 99.7 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005340.1:99712-101028:- gene-YNL280C_CBS6412 rna-NM_001183118.1_CBS6412 cds-NP_014119.1_CBS6412 99.5 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005324.1:99995-101311:- gene-YNL280C_CBS6413 rna-NM_001183118.1_CBS6413 cds-NP_014119.1_CBS6413 99.5 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001535.1:102927-104243:- gene-YNL280C_CENPK1137D rna-NM_001183118.1_CENPK1137D cds-NP_014119.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005484.1:100519-101835:- gene-YNL280C_EthanolRed rna-NM_001183118.1_EthanolRed cds-NP_014119.1_EthanolRed 99.5 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005548.1:95256-96572:- gene-YNL280C_FaliES1 rna-NM_001183118.1_FaliES1 cds-NP_014119.1_FaliES1 99.5 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000082.1:6480-7796:- gene-YNL280C_JAY291 rna-NM_001183118.1_JAY291 cds-NP_014119.1_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005420.1:107739-109055:- gene-YNL280C_MUCL30387 rna-NM_001183118.1_MUCL30387 cds-NP_014119.1_MUCL30387 99.7 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005452.1:106292-107608:- gene-YNL280C_MUCL30388 rna-NM_001183118.1_MUCL30388 cds-NP_014119.1_MUCL30388 99.8 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005292.1:100782-102098:- gene-YNL280C_MUCL39482 rna-NM_001183118.1_MUCL39482 cds-NP_014119.1_MUCL39482 99.5 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005436.1:103032-104348:- gene-YNL280C_MUCL42920 rna-NM_001183118.1_MUCL42920 cds-NP_014119.1_MUCL42920 99.7 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011823.1:109064-110380:- gene-YNL280C_NCIM3186 rna-NM_001183118.1_NCIM3186 cds-NP_014119.1_NCIM3186 99.4 100.0 Verified 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005276.1:102649-103965:- gene-YNL280C_NCYC1407 rna-NM_001183118.1_NCYC1407 cds-NP_014119.1_NCYC1407 99.5 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994153.1:99816-101132:- gene-YNL280C_PE2H3 rna-NM_001183118.1_PE2H3 cds-NP_014119.1_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999885.1:99204-100520:- gene-YNL280C_PE2H4 rna-NM_001183118.1_PE2H4 cds-NP_014119.1_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001146.8:109095-110411:- gene-YNL280C_S288C rna-NM_001183118.1_S288C cds-NP_014119.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000034.1:6547-7863:- gene-YNL280C_SA1 rna-NM_001183118.1_SA1 cds-NP_014119.1_SA1 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005500.1:96113-97429:- gene-YNL280C_ThermosaccDry rna-NM_001183118.1_ThermosaccDry cds-NP_014119.1_ThermosaccDry 99.5 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005468.1:115014-116330:- gene-YNL280C_VR1 rna-NM_001183118.1_VR1 cds-NP_014119.1_VR1 100.0 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000030.1:6481-7797:- gene-YNL280C_ZTW1 rna-NM_001183118.1_ZTW1 cds-NP_014119.1_ZTW1 99.5 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047500.1:106384-107700:- gene-YNL280C_Sparadoxus rna-NM_001183118.1_Sparadoxus cds-NP_014119.1_Sparadoxus 92.1 100.0 Verified 1 1 1 False True False False False

Additional files