ERG12 (YMR208W)


Gene profile

Gene name: ERG12
Reference locus (S288C): YMR208W
Gene biotype: protein_coding

Description: Mevalonate kinase; acts in the biosynthesis of isoprenoids and sterols, including ergosterol, from mevalonate; human MVK functionally complements the lethality of the erg12 null mutation; Belongs to the GHMP kinase family. Mevalonate kinase subfamily

Top 10 interactors (score): ERG8 (0.999); MVD1 (0.999); ERG13 (0.997); HMG1 (0.995); ERG20 (0.994); IDI1 (0.994); HMG2 (0.994); ERG10 (0.993); ERG7 (0.966); ERG9 (0.965); BTS1 (0.933); ERG27 (0.928); ERG25 (0.926); LSB3 (0.918); ERG1 (0.91); ERG26 (0.906); ERG11 (0.892); ERG4 (0.891); ERG6 (0.88); ERG24 (0.858)

Homologues (species, bitscore): MVK (Homo sapiens, 195.3); Mvk (Mus musculus, 193.4); mvk (Danio rerio, 193.4); mvk (Xenopus tropicalis, 195.7); CG33671 (Drosophila melanogaster, 144.8); mvk-1 (Caenorhabditis elegans, 134.4); MK (Arabidopsis thaliana, 158.3)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005307.1:724392-725723:+ gene-YMR208W_AKU4011 rna-NM_001182715.1_AKU4011 cds-NP_013935.1_AKU4011 99.9 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000069.1:228884-230215:- gene-YMR208W_BG1 rna-NM_001182715.1_BG1 cds-NP_013935.1_BG1 99.5 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005515.1:668607-669938:+ gene-YMR208W_Bruggeman rna-NM_001182715.1_Bruggeman cds-NP_013935.1_Bruggeman 99.6 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005531.1:671862-673193:+ gene-YMR208W_CAT1 rna-NM_001182715.1_CAT1 cds-NP_013935.1_CAT1 99.6 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005371.1:656654-657985:+ gene-YMR208W_CBS1585 rna-NM_001182715.1_CBS1585 cds-NP_013935.1_CBS1585 99.9 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005355.1:660906-662237:+ gene-YMR208W_CBS436 rna-NM_001182715.1_CBS436 cds-NP_013935.1_CBS436 99.6 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005339.1:768211-769542:+ gene-YMR208W_CBS6412 rna-NM_001182715.1_CBS6412 cds-NP_013935.1_CBS6412 99.9 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005323.1:655802-657133:+ gene-YMR208W_CBS6413 rna-NM_001182715.1_CBS6413 cds-NP_013935.1_CBS6413 100.0 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001534.1:679191-680522:+ gene-YMR208W_CENPK1137D rna-NM_001182715.1_CENPK1137D cds-NP_013935.1_CENPK1137D 99.9 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005486.1:716858-718189:+ gene-YMR208W_EthanolRed rna-NM_001182715.1_EthanolRed cds-NP_013935.1_EthanolRed 99.6 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005547.1:662510-663841:+ gene-YMR208W_FaliES1 rna-NM_001182715.1_FaliES1 cds-NP_013935.1_FaliES1 99.8 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000141.1:122196-123527:- gene-YMR208W_JAY291 rna-NM_001182715.1_JAY291 cds-NP_013935.1_JAY291 99.6 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005419.1:662154-663485:+ gene-YMR208W_MUCL30387 rna-NM_001182715.1_MUCL30387 cds-NP_013935.1_MUCL30387 99.6 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005451.1:668931-670262:+ gene-YMR208W_MUCL30388 rna-NM_001182715.1_MUCL30388 cds-NP_013935.1_MUCL30388 99.6 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005291.1:657724-659055:+ gene-YMR208W_MUCL39482 rna-NM_001182715.1_MUCL39482 cds-NP_013935.1_MUCL39482 99.9 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005435.1:665049-666380:+ gene-YMR208W_MUCL42920 rna-NM_001182715.1_MUCL42920 cds-NP_013935.1_MUCL42920 99.9 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011822.1:684421-685752:+ gene-YMR208W_NCIM3186 rna-NM_001182715.1_NCIM3186 cds-NP_013935.1_NCIM3186 99.6 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005275.1:657376-658707:+ gene-YMR208W_NCYC1407 rna-NM_001182715.1_NCYC1407 cds-NP_013935.1_NCYC1407 100.0 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994152.1:667223-668554:+ gene-YMR208W_PE2H3 rna-NM_001182715.1_PE2H3 cds-NP_013935.1_PE2H3 99.6 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999884.1:668238-669569:+ gene-YMR208W_PE2H4 rna-NM_001182715.1_PE2H4 cds-NP_013935.1_PE2H4 99.6 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001145.3:684467-685798:+ gene-YMR208W_S288C rna-NM_001182715.1_S288C cds-NP_013935.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000002.1:122308-123639:- gene-YMR208W_SA1 rna-NM_001182715.1_SA1 cds-NP_013935.1_SA1 99.6 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005499.1:658681-660012:+ gene-YMR208W_ThermosaccDry rna-NM_001182715.1_ThermosaccDry cds-NP_013935.1_ThermosaccDry 99.6 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005467.1:671749-673080:+ gene-YMR208W_VR1 rna-NM_001182715.1_VR1 cds-NP_013935.1_VR1 99.6 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000028.1:74385-75716:+ gene-YMR208W_ZTW1 rna-NM_001182715.1_ZTW1 cds-NP_013935.1_ZTW1 99.6 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047499.1:676454-677785:+ gene-YMR208W_Sparadoxus rna-NM_001182715.1_Sparadoxus cds-NP_013935.1_Sparadoxus 88.5 100.0 Verified 1 1 1 False True False False False

Additional files